Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02544 ATGGCGAAGTTCGGCGAGGGTGATAAACGTTGGATCGTGGCGGACCGTGCTGACGGCACCAACGTTCACAACTGGCACTGGGCTGAGACCAATTGTCTCGAATGGTCCAGAACCTTCTTCCGAAAGCTTTTCGCCAACGTCGCCGTCGCTGACGGTGAGGTCTCCGTCACCGTCAAGAAAGTGGATAAACTCGACGGCGAGGCCTACGTTAACGTGCGCAAAGGGAAGGTGATTCCCGGGTACGAGATCGGCGTGACACTCGCTTTGGAGGGCGAGGTGCGTGGCTCCGACGGGAAGCTCCTGCAGAAGGTCGATGGAGCCGTCGAGATCCCGTACATCTCCGATGAGAACGCTGGCGAGGATCCCGAGGTTAGGGTTACGGTGAAGGATAGCGGAGAGGTTGGGAAGAGGTTGAAGCAGTTGGTGGTAGAGAAGGTGAAACCGGTGATTTTGGAGAAGGTTAGGGTTTGGGTGGAGAGCATGGCGAAGGGTGGGCCCGTGAAGGATGACCTTGAAGCGAAGAAAGTGGTGCCACAGAAGAACACTAGTAGTATTAATAGTAATGGTAATGTTAATATTAATGGTAATAATGAGAATGATTCGAAGAAGAATGAGAAGAGTGAGGGGAAGAAGGGGTTTAAAACAATCAATTTGACAGAGAGGTTTAATTGTAGGGCGAAGGATTTGTTTGAGATTTTGATGGATGAGAATAGATGGAGAGGTTTCACACACAGCAATGCGAAGATTAGCAAGGAGGTTGGGGGTGAGTTTTGTATTTTCGATGGGTCTGTGACTGGGGTAAACTTGGAGTTGCAGGAAGGGAAGTTGATCGTGCAGAGGTGGAGATTTGGGAGCTGGCTTGATGGGATTCAATCCACGGTCAGGATTGTGTTTGAGGAGCCTGATAGTGGAGTCACAGTTGTTAAGCTCACGCATAGTGATGTGCCAGAAGAAGACAGATATGGCAATGCGACTGTGGTGGAAAATACAGAGAGGGGATGGCGGGATCTCATTTTCCAAAGGATAAGGGCTATGTTTAGTTTTGGAATTTGA 1053 0.4986 MAKFGEGDKRWIVADRADGTNVHNWHWAETNCLEWSRTFFRKLFANVAVADGEVSVTVKKVDKLDGEAYVNVRKGKVIPGYEIGVTLALEGEVRGSDGKLLQKVDGAVEIPYISDENAGEDPEVRVTVKDSGEVGKRLKQLVVEKVKPVILEKVRVWVESMAKGGPVKDDLEAKKVVPQKNTSSINSNGNVNINGNNENDSKKNEKSEGKKGFKTINLTERFNCRAKDLFEILMDENRWRGFTHSNAKISKEVGGEFCIFDGSVTGVNLELQEGKLIVQRWRFGSWLDGIQSTVRIVFEEPDSGVTVVKLTHSDVPEEDRYGNATVVENTERGWRDLIFQRIRAMFSFGI 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02544 350 CDD SRPBCC_Aha1 215 348 - -
Vian3g02544 350 SMART Aha1_N_2 29 163 IPR015310 GO:0001671|GO:0051087
Vian3g02544 350 Pfam Activator of Hsp90 ATPase homolog 1-like protein 226 345 IPR013538 -
Vian3g02544 350 Pfam Activator of Hsp90 ATPase, N-terminal 29 163 IPR015310 GO:0001671|GO:0051087
Vian3g02544 350 SUPERFAMILY Activator of Hsp90 ATPase, Aha1 20 163 IPR036338 -
Vian3g02544 350 SUPERFAMILY Bet v1-like 215 349 - -
Vian3g02544 350 Gene3D - 18 175 IPR036338 -
Vian3g02544 350 PANTHER HEAT SHOCK PROTEIN 90 HSP90 CO-CHAPERONE AHA-1 1 162 IPR015310 GO:0001671|GO:0051087
Vian3g02544 350 MobiDBLite consensus disorder prediction 177 198 - -
Vian3g02544 350 Gene3D - 213 349 IPR023393 -
Vian3g02544 350 MobiDBLite consensus disorder prediction 176 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02544 Vian-Chr3 39626180 39628303 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02544 K26216 - gmx:100810706 539.265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g02544 3 39626180 39628303 Vian3g02544 3 39626180 39628303 ECH
Vian2g02028 2 39951275 39952538 Vian3g02544 3 39626180 39628303 PCT