Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02078 ATGGCGGCCATAACCCGCCTCCGCCTCGCCAAGCGCGCCTCCTTCGTCTCTCCTCTGGCCACCCGAACTTTCTCCTCCTCCCAAGTCAACGCGCCGCCGCACTTCGCCGCCTCCTTCCGCCGGGTTCCGCCGCTCGACAACCTGAGCAAGAGGTGTGTGCAGTGGGTGTTTCTCGGTTGTCCCGGCGTCGGCAAAGGCACCTACGCCAGTCGCCTCTCCAACCTCCTTGCCGTCCCGCACATCGCCACCGGCGATCTCGTCCGCGACGAACTCGCCTCCTCTGGTCCCCTCTCTTCCCAGCTATCAGAAATTGTAAAACAAGGTCAATTGGTGTCAGATGAAATTATAATAAGTTTATTGTCAAAGAGACTTGCAGCTGAGGAAGCTAAAGGCGAATTGGGATTCATTCTTGATGGTTTTCCTAGAACAATAAAGCAAGCAGAAATATTGGAAGGGGTAACGGACATTGACTTGGTAATCAATCTGAAGCTCCGAGAAGATGTTCTGCTTGAGAAATGCCTTGGTAGGAGAATTTGTAATCAGTGTGGGGGTAATTTTAATGTTGCTTCAATTGACATTAAGGCTGAGAATGGGAGCCCCGGAATGACTCAGCCTGTGGAGGAATTTTACCGTAGCAGAGGAAAATTATTGGAGTTTAACCTGCCAGGGGGAATCCCAGAATCTTGGCCTAAGTTGCTACAAGCCCTTAATCTTGATGATTACGAAGACAAGCGATCTGCTGCAGCATAA 750 0.512 MAAITRLRLAKRASFVSPLATRTFSSSQVNAPPHFAASFRRVPPLDNLSKRCVQWVFLGCPGVGKGTYASRLSNLLAVPHIATGDLVRDELASSGPLSSQLSEIVKQGQLVSDEIIISLLSKRLAAEEAKGELGFILDGFPRTIKQAEILEGVTDIDLVINLKLREDVLLEKCLGRRICNQCGGNFNVASIDIKAENGSPGMTQPVEEFYRSRGKLLEFNLPGGIPESWPKLLQALNLDDYEDKRSAAA 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02078 249 Pfam Adenylate kinase 58 212 - -
Vian3g02078 249 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 55 236 IPR027417 -
Vian3g02078 249 Hamap Adenylate kinase [adk]. 53 237 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vian3g02078 249 PRINTS Adenylate kinase signature 135 151 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vian3g02078 249 PRINTS Adenylate kinase signature 56 69 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vian3g02078 249 PRINTS Adenylate kinase signature 84 98 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vian3g02078 249 PRINTS Adenylate kinase signature 201 215 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vian3g02078 249 PANTHER NUCLEOTIDE KINASE 50 233 IPR000850 GO:0005524|GO:0006139|GO:0019205
Vian3g02078 249 ProSitePatterns Adenylate kinase signature. 135 146 IPR033690 -
Vian3g02078 249 Gene3D - 46 240 IPR027417 -
Vian3g02078 249 CDD ADK 54 220 IPR000850 GO:0005524|GO:0006139|GO:0019205
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02078 Vian-Chr3 27262949 27265944 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02078 K00939 - gmx:100777619 407.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g02078 3 27262949 27265944 Vian3g02078 3 27262949 27265944 ECH
Vian2g02324 2 43606624 43610563 Vian3g02078 3 27262949 27265944 PCT