LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vian3g02044	ATGGAGTTTGACGGCGTTCTCCTCGGAATGTGTAACCCTCTCCTCGACATTTCTGCCGTCGTCGACGACGATTTCTTGCAACGATATGGTATCAAGTTGAACGATGCGATTCTCGCCGAGGATAAGCACAAGCCTATGTGTCGCAAAACTAATGTGGAGTACATTGCTGGAGGTGCTACTCAGAATTCAATCCGGGTTGCTCAGTGGATGCTTCAAGCACCTGGTGCCACAGGGTACATAGGTTGCATAGGAAAGGACAAATTTGGGGAGGAGATGAAGAAGAGATGTTCACTTGATGGTGTAAAGGTTCACTATTATGAAATCGACACTGCACCCACGGGAACTTGTGCTGTTTGTGTGGTTGGTGGTGAAAGGTCGCTCGTTGCAAACTTATCAGCTGCAAATTGCTATAAGTCGGAGCATTTGGTCAAACCAGAAAATTGGGCCTTAGTTGAAAAGGCAAAGTACTACTATATTTCTGGTTTTTTCCTCACCGTGTCTCCCGATTCCATTCAATTAGTTGCTGAACACGCAGCTGCAAATGGCAAGATCTTCATGATGAACCTTTCCGCTCCCTTTATCTGCGAGTTCTTCAAGGATGCACTGTTGAAAGTGCTACCATACATGGACTATGTTTTTGGAAATGAGACTGAAGCAAGAACATTTTCTAAAGTTCAAGGCTGGGAGACTGATAACGTCGAGGAAATAGCTTTAAGGATTTCCAAGTTGCCAAAGGCATCGGGAACACATAAAAGGATTACCGTTATCACACAAGGTGCAGATCCTGTCTGTGTTGCCGAGGATGGGAAAGTGAAATTGTACCCTGTGATACTATTACCTAAAGAGAAATTAGTTGACACAAATGGAGCAGGAGATGCGTTTGTAGGGGGATTTGTTTCACAATTGGTTAAGGAGAAGCCCATTGAAGAATGCGTGAGGGCTGGGTGTTATGCAGCCAATGTTATCATCCAAAGGCCTGGCTGCACGTACCCAGCGAAGCCTGATTTTCATTGA	1014	0.4507	MEFDGVLLGMCNPLLDISAVVDDDFLQRYGIKLNDAILAEDKHKPMCRKTNVEYIAGGATQNSIRVAQWMLQAPGATGYIGCIGKDKFGEEMKKRCSLDGVKVHYYEIDTAPTGTCAVCVVGGERSLVANLSAANCYKSEHLVKPENWALVEKAKYYYISGFFLTVSPDSIQLVAEHAAANGKIFMMNLSAPFICEFFKDALLKVLPYMDYVFGNETEARTFSKVQGWETDNVEEIALRISKLPKASGTHKRITVITQGADPVCVAEDGKVKLYPVILLPKEKLVDTNGAGDAFVGGFVSQLVKEKPIEECVRAGCYAANVIIQRPGCTYPAKPDFH	337

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vian3g02044	337	CDD	adenosine_kinase	5	331	-	-
	Vian3g02044	337	Gene3D	-	15	130	-	-
	Vian3g02044	337	Pfam	pfkB family carbohydrate kinase	29	331	IPR011611	-
	Vian3g02044	337	SUPERFAMILY	Ribokinase-like	8	331	IPR029056	-
	Vian3g02044	337	PANTHER	ADENOSINE KINASE	4	337	IPR001805	GO:0004001\|GO:0006166
	Vian3g02044	337	PRINTS	Adenosine kinase signature	148	174	IPR001805	GO:0004001\|GO:0006166
	Vian3g02044	337	PRINTS	Adenosine kinase signature	257	276	IPR001805	GO:0004001\|GO:0006166
	Vian3g02044	337	PRINTS	Adenosine kinase signature	79	93	IPR001805	GO:0004001\|GO:0006166
	Vian3g02044	337	PRINTS	Adenosine kinase signature	62	71	IPR001805	GO:0004001\|GO:0006166
	Vian3g02044	337	PRINTS	Adenosine kinase signature	110	125	IPR001805	GO:0004001\|GO:0006166
	Vian3g02044	337	Gene3D	-	8	323	IPR029056	-
	Vian3g02044	337	FunFam	Adenosine kinase 2	50	323	-	-
	Vian3g02044	337	ProSitePatterns	pfkB family of carbohydrate kinases signature 2.	286	299	IPR002173	GO:0016301

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vian3g02044	Vian-Chr3	25982639	25986544	Dispersed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vian3g02044	K00856		-	gmx:100780391	630.943

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vian2g02366	2	44090119	44093712	Vian3g02044	3	25982639	25986544	PCT