Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g02002 ATGGCTCGCTCTTTCACTAACGTTAAGGTTCTCTCTGCTCTTGTGGCCGACGGATTCTCCAACACTCCAACCAGGCGTGGGTTTGCGGCGGCGGCGGCGGCGGCGGCGACACAGAGCGCAAGCAGAGGAGGTGCCTCCATCAGCGGCAATATGGTTCCAAAATCAGGGGAAGAGAAGGTGAGAGGTGCTGAAAAGGTTTCGTGGGTCCCAGACCCTGTGACCGGTTACTACAGACCAGAGAACACCAACGAGATTGATGTTGCTGACCTGCGAGCTACGGTTTTGGGCGGAAAATTCAACCACTAA 306 0.5588 MARSFTNVKVLSALVADGFSNTPTRRGFAAAAAAAATQSASRGGASISGNMVPKSGEEKVRGAEKVSWVPDPVTGYYRPENTNEIDVADLRATVLGGKFNH 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g02002 101 PANTHER LATE EMBRYOGENIS ABUNDANT PROTEIN 2-RELATED 1 95 IPR004926 -
Vian3g02002 101 Pfam Late embryogenesis abundant protein 1 95 IPR004926 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g02002 Vian-Chr3 24821874 24822401 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g02002 - - vun:114190398 169.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02873 2 49563909 49564299 Vian3g02002 3 24821874 24822401 PCT