Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01945 ATGGCAGAGCTAAATGAGAAGACAAAGGCAATGTTAAAACTAATTGAAGAAGATGCAGATTCCTTTGCCCAACGTGCTGAGATGTATTACAAGAAGAGACCACAACTTGTGAGCATGGTTGAAGACTTCTATAGGACACATCGATCATTAGCTGAGCGGTATGATCAAATCGCTGGAATTCGTCAGCAGAAGACTGGAGGGTCCCCCTTTTCTCCACTCAAGCATCATCAACCAGAGAAGTTGATAAGTTTTGCGAATGACTGTTATGATAGCTATTCTGAGAGTTGTGATGTAGAGGAGTCTGGGGAATCTGAAATTGATGATCCTGAGCAAGAAGAGGAAGAGGATTCCATATTCAATAACTGTGCACAACTGGAGGAAGTTCAGTTTGAGAGACTTGGTGAAGAGAACAAGGATCATAAGGGTCAGAACAAGCAAAAATATAACATTTACGAAGCAGTGATGTTGAGGGAAGAAATAGAGCAACTCAGAAAAGAGAACAGGGTTCAGAAGGATGAACTCGACCGGAAAAGCATCACTTTTGTTGAATTAATGATGCTGAGGGAAGAAATAGAGCAACTAAGAAAAGAGAATAGAGCACAGAAGGATGAACTCAACCAGAAAGATATCATTTGTGGTGAAGCAATGATGTTGAGGGAAGAAATAGAACAACTCGGTAAAGAAAATAGAGTTCTGAAGGATGAACTAAGCCAGAAAAGTATCATTTGTGGTGAAGTAATGATGTTGAGGGAAGAAATAGAGCAATTCAGAAAAGAGAATAGAACGCAGAAGCATGAACTCAACCAGAAAGATATCATTTGTGGTAAAGCAATGATGCCGAGGGAAGAAATAGAGCAACTCAGTAAAGAGAATAGAGTTATGAAGGATGAACTAAACCAGAAAAGTATCATTTGTGGTGAAGTAATGATGTTGAAGGAAGAAATAGAGCAACTCAGGAAAGAGAATAGAGCGCAGAAGGATGAACTCCACCAGAAAGACAACATTTGCAGTGAAATAATGATGTTGAGGGAAGAAATAGGGCAATTGGGAAAAGAGAATGCAGCGCTGAAGGATGAACTCAACAAGAAATATATCATTTGTGGAGAAATAATGATGTTGAGGGAAGAAATAGAACAACTCAGGAAATATAATAGAGGGCAGAAGAATGAACTCCACCAGAAAGGTATCAAGTGTGAAGTAACGATGTCGAGGGAAGAAAAAGAGAATAGAGTGAAGAATGATGAACTAAACCCAGAAGATAGCGTTTGTGGTGAAGTAGTGATGTTAAGGGAAGAAATAAAACGACTTGAAAAAGATGAAAGAGCACAAAAAGGTACCCTTTCTGGTGAAGTAATGAAGTTAAGGCAGGAGAATAGCGCGCAGAAGGACCATCTTAAGCAAAAAGACCAAGAGAAAATAGAGGTGATAAGACACCTGAGTTTAGCTATAGATATGCTGAAGCAGGAGAACATAAGGATGAGAAGCTTCATTGCTAAGGAATCTTCCAACAAATGGAAGAATCCATTTGGGTTAAAGAATTTCATGGGATCATTATCAGAGCAGTTGTTTAATGGAATTACAAATAATCAACCTAGTCTTGTAGCTCTCTAG 1611 0.3892 MAELNEKTKAMLKLIEEDADSFAQRAEMYYKKRPQLVSMVEDFYRTHRSLAERYDQIAGIRQQKTGGSPFSPLKHHQPEKLISFANDCYDSYSESCDVEESGESEIDDPEQEEEEDSIFNNCAQLEEVQFERLGEENKDHKGQNKQKYNIYEAVMLREEIEQLRKENRVQKDELDRKSITFVELMMLREEIEQLRKENRAQKDELNQKDIICGEAMMLREEIEQLGKENRVLKDELSQKSIICGEVMMLREEIEQFRKENRTQKHELNQKDIICGKAMMPREEIEQLSKENRVMKDELNQKSIICGEVMMLKEEIEQLRKENRAQKDELHQKDNICSEIMMLREEIGQLGKENAALKDELNKKYIICGEIMMLREEIEQLRKYNRGQKNELHQKGIKCEVTMSREEKENRVKNDELNPEDSVCGEVVMLREEIKRLEKDERAQKGTLSGEVMKLRQENSAQKDHLKQKDQEKIEVIRHLSLAIDMLKQENIRMRSFIAKESSNKWKNPFGLKNFMGSLSEQLFNGITNNQPSLVAL 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01945 536 Coils Coil 451 471 - -
Vian3g01945 536 PANTHER PROTEIN NETWORKED 4A 2 94 - -
Vian3g01945 536 Coils Coil 246 266 - -
Vian3g01945 536 Coils Coil 184 211 - -
Vian3g01945 536 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 1 61 IPR011684 GO:0003779
Vian3g01945 536 Coils Coil 339 359 - -
Vian3g01945 536 Pfam KIP1-like protein 2 55 IPR011684 GO:0003779
Vian3g01945 536 Coils Coil 370 390 - -
Vian3g01945 536 Coils Coil 153 180 - -
Vian3g01945 536 Coils Coil 215 235 - -
Vian3g01945 536 Coils Coil 308 335 - -
Vian3g01945 536 MobiDBLite consensus disorder prediction 96 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01945 Vian-Chr3 23119694 23121304 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01945 - - vum:124824825 1028.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g01945 3 23119694 23121304 Vian3g01945 3 23119694 23121304 ECH
Vian2g02925 2 49955871 49957602 Vian3g01945 3 23119694 23121304 PCT