Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01888 ATGTCTTACTCAAGTGTCTGTCAAGGGTTACAATCAAGTGTGGAACCCTGCCTTCTGGAACCACGTGTGCTAAAGCTCAAATTGGCTCCACCAGGGTCCAACTCCAACCTTTCTCCACCACCCTCTCAATGCCCTGCCTCCAACACTCTCCCACACACTCCAAACCATCAACATGGAAACAAAAACTGGACTTTCCTTCAATCCCTCTCCAACATTTCTCATTGCAAGGACCCAGAAACTCACAAAGTCTACGTCCACCCTTCTGTTAAGCGCTCCTCTTCAATGCTCAGCGCAAAGAGCTTGGAACTATGCACCGAAAGCTTAGGCTGCGAAACTGGTAGTAATGCCAGTGATGACACTCAAGACATGTCTTTATTTTCACTTGAAAGTATCCCCACTTTAAGGAGTAACGACACTCCAGTGGTAATGGTAACTAATAAAAATTCTCAGTCTAAAAGATTGAACAAGCGAGGTAGTGGCACCAGCACCTTTCCACCTCCCTTGACTTCGATGGGGGAGGTCAGCGTTAGGTCTCATCGTGAAGATGGTAGGCTTATCTTGGAAGCCGTAACTTCCTCTTCTCCTCAACCCTATTTTGAAGCGGAGCGTGGCAATGGCAGGCTTAGGCTTCGACTCTTTGAGAGTGAGGCCAGTTGTTATGACGATGAAGTTGCTGATGATGAAGGCTTGAAGCAACAAGTATCTGATGAGGAAGAAGAAGAAGGACAAGAACAAGAACAAGAAGAAGATGATGATGATAATGTTTTGGTGGAAGAGGAGTTGGAAGAGTACGTTGGAAATTCCGAGGATGAAATGGGTATGACAAAGTTTGTGAGGCCAAGCAGGTGCAAGGAAAGTGGGAATAGAGTCATTTTTGGCGATGGATACTTTGAGCAACCCCCTCTTTCTCTTTGCCTCTGA 921 0.4615 MSYSSVCQGLQSSVEPCLLEPRVLKLKLAPPGSNSNLSPPPSQCPASNTLPHTPNHQHGNKNWTFLQSLSNISHCKDPETHKVYVHPSVKRSSSMLSAKSLELCTESLGCETGSNASDDTQDMSLFSLESIPTLRSNDTPVVMVTNKNSQSKRLNKRGSGTSTFPPPLTSMGEVSVRSHREDGRLILEAVTSSSPQPYFEAERGNGRLRLRLFESEASCYDDEVADDEGLKQQVSDEEEEEGQEQEQEEDDDDNVLVEEELEEYVGNSEDEMGMTKFVRPSRCKESGNRVIFGDGYFEQPPLSLCL 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01888 306 MobiDBLite consensus disorder prediction 147 169 - -
Vian3g01888 306 PANTHER FANTASTIC FOUR-LIKE PROTEIN (DUF3049) 6 272 IPR021410 -
Vian3g01888 306 MobiDBLite consensus disorder prediction 30 59 - -
Vian3g01888 306 MobiDBLite consensus disorder prediction 147 175 - -
Vian3g01888 306 MobiDBLite consensus disorder prediction 232 267 - -
Vian3g01888 306 MobiDBLite consensus disorder prediction 39 59 - -
Vian3g01888 306 Pfam Fantastic Four meristem regulator 164 212 IPR046431 -
Vian3g01888 306 MobiDBLite consensus disorder prediction 221 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01888 Vian-Chr3 22029808 22030728 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01888 - - vum:124837608 555.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g01888 3 22029808 22030728 Vian3g01888 3 22029808 22030728 ECH
Vian2g02101 2 40796762 40797733 Vian3g01888 3 22029808 22030728 PCT