Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01879 ATGAAGGACTTTCCTTCTTGTTTTGGAGAAAATGGGGTTCAGGTTGCTGACTCATCCTCATCAAGCACCACAAGAGCGGCTCAAAATGTTGTCACGTGTGTGTACCAGTGCAAATTAAGACGCCGTTCATGTCTGATCACGGTCTCCTGGACCAAAACTCTCATGGGTCAAGGCTTGAGCGTGGGAATTGATGATTTGGGAAATCATTGTCTCTGCAAGGTTGAGATAAAGCCATGGCTATTCTCCAAGAGAAAAGGGTCCAAGAATTTGGAGGTCCAATCTGGTAAAATTGATATCTTTTGGGATTTGAGCTGTGCCAAGTTTGGTTCCGGGCCTGAGCCGCTGGAGGGTTTCTACTTAGTGGTGGTGTTCAACAAGAAGCTGGTGTTGCTGCTTGGGGATCTGAAAAAGGAGGCATGCAAGAAGATGGACAGTGATTGTGCTTTTTCTCACAGTGGTACCGTTTTCATTGCAAAAAGAGAGCATATTTTTGGGAAGAAGTTTTATGGTGCAAAGGCTCAGTTTTTTGACAAGGGGCAAGTGCATGATGTCACAATTGAGTGTGATACTGTGGGTTTTAACGATCCCTCTCTTGTGATTCGGATTGATAGCAAGACAGTGATGCAGGTGAAGCGTCTCAAGTGGAAGTTCCGAGGGAATCACACCATTTTGGTGGATGGGGTTCCGGTTGAAGTGTTTTGGGATGTGCATAGTTGGCTCTATGGGAATGCTATGGGCAATGCAGTCTTCATGTTCCAAACATGCATTTCAAGTGAAAAGGTGTGGGAAGGCCAATCAGCTTCTGATACCACTGCACTAACATTGTCTTCTTCTCAGCAGCTTAAGGATTCCCAGCTGCAATGCTTTGGGTTCTCTCTCATTTTGTATGCTTGGAAACATGAGTAG 906 0.4525 MKDFPSCFGENGVQVADSSSSSTTRAAQNVVTCVYQCKLRRRSCLITVSWTKTLMGQGLSVGIDDLGNHCLCKVEIKPWLFSKRKGSKNLEVQSGKIDIFWDLSCAKFGSGPEPLEGFYLVVVFNKKLVLLLGDLKKEACKKMDSDCAFSHSGTVFIAKREHIFGKKFYGAKAQFFDKGQVHDVTIECDTVGFNDPSLVIRIDSKTVMQVKRLKWKFRGNHTILVDGVPVEVFWDVHSWLYGNAMGNAVFMFQTCISSEKVWEGQSASDTTALTLSSSQQLKDSQLQCFGFSLILYAWKHE 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01879 301 PANTHER EXPRESSED PROTEIN 4 299 IPR008586 -
Vian3g01879 301 Pfam Plant protein of unknown function (DUF868) 27 299 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01879 Vian-Chr3 21881064 21881969 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g01879 1 301 EF-hand Containing Proteins AT5G28150 62.376 1.55e-128 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01879 - - gmx:100793503 540.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g01879 3 21881064 21881969 Vian3g01879 3 21881064 21881969 ECH
Vian2g02119 2 41042134 41043039 Vian3g01879 3 21881064 21881969 PCT
Vian6g00935 6 26600441 26601334 Vian3g01879 3 21881064 21881969 PCT