Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01873 ATGGAGACCCTTTTTGTTGTTGAGCAGCATAAGAACCAATACTACAGCAGGTCCAAGTCCCAGGGTCATGCTCGATTCGGGGGTTCACCTTCCAGGGGCTTTAGGGATATCAATTGCAGGACTTTTGAGTCTGGGAGGACAGGTATATTGCCATCTCCTTTGAAATCTCATGGTTCCCCTAAATCACCACCTAACTCTGACTACAAAACGTTTGGGAAAGTAAAAGTTACTCCCAAGAGCACCCCAATTCCCATCAATGGTATAGCTTGTAGGAGAAAAGAGAGAGAAGATGTCCCTGGTGGTGTTGATCTTTTGCTTTCTGAGTTATGGGCTGGTCCTACCTACTCAAATTCTCCACCTCCTAGTTCCTTACCAATTCCCAAGTTTTCTGTCAAACCAAAGAGGACTGTGTCCCTTAATCTTCCTGGTTCCTCCCCTGAGATTGAAATGCGCCCGGTGGCTAAATCTGCACCCTCTTCCCCTGCCAGGGAGCATTTGGATTTGCCTTTTACTAGGGATCTCTTTGTTAATGCTGATTCTGCTACGAAGACCCTGTGTCGGATTCTTAATCTTAACATCAATGACCACTGA 591 0.4602 METLFVVEQHKNQYYSRSKSQGHARFGGSPSRGFRDINCRTFESGRTGILPSPLKSHGSPKSPPNSDYKTFGKVKVTPKSTPIPINGIACRRKEREDVPGGVDLLLSELWAGPTYSNSPPPSSLPIPKFSVKPKRTVSLNLPGSSPEIEMRPVAKSAPSSPAREHLDLPFTRDLFVNADSATKTLCRILNLNINDH 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01873 196 MobiDBLite consensus disorder prediction 45 68 - -
Vian3g01873 196 PANTHER BNAA03G57290D PROTEIN 1 195 - -
Vian3g01873 196 Pfam Proline-rich nuclear receptor coactivator motif 110 129 - -
Vian3g01873 196 MobiDBLite consensus disorder prediction 141 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01873 Vian-Chr3 21760101 21760691 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01873 - - gmx:100791409 336.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g01873 3 21760101 21760691 Vian3g01873 3 21760101 21760691 ECH
Vian2g02124 2 41097668 41098252 Vian3g01873 3 21760101 21760691 PCT