Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01872 ATGCTGCTCAGAAACAGATCAAGAGCTGTCACCAAACCAGGTTTGATGGGTGATCACAGCTCCCAGCCAAGTCCAAATCAGAGTTACAGAAGAACCATCCCTTCTTTGTTTTCACCCAAATTCCGTGACTTCTCAGTCAAGTGTCTCTCAGGAGCTGAGGCTTTGAGAAGCCCCACCTCCATTCTTGACACCAGAGCCTTAACCCCATTTGGGAATCCTTTGTCACATGAGAAGAAGATCGAAACTTTTGCCCCCCCAAGAGTACCCTCTGAAAACAGAACTTCATGGGACTCAAAAGGCATTGGTCTTGCTCTTGTTGGTGCACTTAAAGATGAACCTGTTCTTCAGACCGCAGCTAAACCGTGTAGTGGAACTGTTCTCTTTGGAACTAAGCATAGGGTCAAAATCCCTCCACTGCCACTCCCTCCTTCATCTTCTGAATCAACTAAAACATGTGCTGTTGCTGGTTTTGCTGCCAAAACCAAGGATTCCCAAAAGCAAATAAAGGATTCTCCGTTATCGGTTGCAACAGGTGTTATGAGTTTGAGTGAGATGGAACTTTTTGAAGAGTACACGTGTGTGATATCTCATGGACCTAATCCTAGAACAACACATATATTCGACAATTGTATCGTGGAAAGTTACTGTTCCCTCCCCAATAACACTCTCTCACCTTCACTCAATTTTCTTAGCATTTGTCACACTTGCAAGAAGCATCTCCAGCAGACAAATGACATTTTTATTTACAGAGGAGAGAAAGCTTTCTGCAGCAAAGAATGTCGTCAGGAAGAGATGGTGCTGGATGGAGCAGAAATTTCAGAATTTGACGAATACTGA 837 0.4385 MLLRNRSRAVTKPGLMGDHSSQPSPNQSYRRTIPSLFSPKFRDFSVKCLSGAEALRSPTSILDTRALTPFGNPLSHEKKIETFAPPRVPSENRTSWDSKGIGLALVGALKDEPVLQTAAKPCSGTVLFGTKHRVKIPPLPLPPSSSESTKTCAVAGFAAKTKDSQKQIKDSPLSVATGVMSLSEMELFEEYTCVISHGPNPRTTHIFDNCIVESYCSLPNNTLSPSLNFLSICHTCKKHLQQTNDIFIYRGEKAFCSKECRQEEMVLDGAEISEFDEY 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01872 278 ProSiteProfiles Zinc finger FLZ-type profile. 228 272 IPR007650 -
Vian3g01872 278 Pfam zinc-finger of the FCS-type, C2-C2 225 269 IPR007650 -
Vian3g01872 278 PANTHER FCS-LIKE ZINC FINGER 8 3 271 IPR044593 -
Vian3g01872 278 MobiDBLite consensus disorder prediction 1 32 - -
Vian3g01872 278 MobiDBLite consensus disorder prediction 17 32 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01872 Vian-Chr3 21754922 21755837 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01872 - - gmx:100811607 397.127
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g01872 3 21754922 21755837 Vian3g01872 3 21754922 21755837 ECH
Vian2g02125 2 41109830 41110913 Vian3g01872 3 21754922 21755837 PCT