Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01866 ATGGCGACTTTGTCACATGCAAACTCTAGGAGAATGTATTCATGGTGGTGGGACAGCCACATAAGCCCTAAAAACTCAAAATGGCTCCAGGAAAATCTGACAGATATGGATGCCAAGGTGAAGCAAATGATTAAGCTTATTGAAGAAGATGCAGATTCTTTTGCAAGGAGAGCAGAAATGTATTATAAAAAACGCCCAGAGCTTATGAAAATGGTTGAAGAGTTTTACAGGGCATATCGAGCGTTGGCTGAGAGATACGATCATGCAACTGGAGTTATCCGCCATGCCCATAGGACCATGTCTGAGGCATTTCCAAATCAAGTTCCTATGATGCTGACAGATGATTTACCTACAGTTTCTCCTCCGGAGACAGAGCCACACACTCCAGAAATGCGCCACTCTTCACGTTCCTTTCTTGATCTAGATGAACCACAAAAGGAGGCTTCTGCTCACTTCCATGTTATAAAAAAGAATGGTGGTTATTCTGGCGAACCTGATTCTGCTTTGAACAAAACAGGTTTGAAACAGCTCAATGATCTCTACATCCCTGGAGAACCGGAAAATCTTACACAGTTTGCAGAAAGGAATGCTAGAAGGGGGCTCAATTTTTTCGAGACACAGGAGAGTAGTGAGCTAACCAATGGAAGCAACAATACTAGGTCTCACTTCTCGTCTGAGTCTGAACGTGTGACAAAAGCTGAGACAGAAATTTTGGCCTTGAAGAAAGCCATTGCAAAATTAGAGGATGAAAAGGAAGCTGGCTTGCTTCAGTATCAACAGTGTTTAGAGAAGCTGTCTAATCTCCAGTTAGAATTGTCTGGCGCACAAGAGAATTCTCAAATACTTGATCAGCGAGCAAGTAAAGCTGAAACTGAAATTCAAGCCTTGAAGGAAACCCAAATTAAATTACAGGCTGAAAGTGAAGATAGTCTTCTTCAGTATCAGGAGTGCTTGGAGAAAATAGCAAAGCTAGAGGAAAGTATTTCTTCTGCGCAAACAGAAGCTGGAGAACTTAATGAAAGAGCTAACAGAGCAGAAAATGAAGCTGAATCCCTACAGCAGGACCTTGCTAGAGTAGAAGCTGAAAAGGAAGCTATCATTGTTCAATATAAACATTGCTCGGAGACACTATCAAAATTGGAGGAGAGATTAGAAGAAGCCCAGGAAAATGCAAGAAAGACTAAGGAGCATGCCACTGTAGCTGAAAATGAAATTGGGGCCTTGAAACTACAAGTTACTAAACTTAATGAAGAAAAGGAAGAAGCTGCTCTCCGTTATCAGCAATGCTTGGAGATGATTTCTGGTCTGGAATATAAACTCTCTTGTGCAGAAGAGGAGGTGCGTAGGCTAAATTCCAAGATAGATGATGAGGTTGAAAAATTACAGAGTTCTGAAAAGAAGTGCCTTCTCCTGGAGACATCAAATCACAATCTGCAGTCTGAGTTACAATCTTTGGCGCAACAAATGGGGTCTCAAAGTGAAGAACTTAATGAGAAGCAGAAAGAATTGAGTAGACTATGGGGTTGCATACAGGAGGAGAGATTGCGCTTCATTGAGGCTGAAACCGCTTTCCAAACTCTTCAGCAGTTACATTCTGAATCTCAGGAAGAGCTTAGATCTCTTGCTGCTGAATTTCACAGTAAAGTGGATATACTAGGGAACGTGGAATCACGTAAGCAGGCTTTAGAGGATGAAATACACAGGGTCAGTGAGGAAAACAAAATTCTAAATGATGTCAAAATTTCTTCATCTTTGTCAATAAAAAATCTGCAGGATGAGATTCTGAATTTGAGGGAGACAATAGAGAAACTTGAACAGGAGGTAGAGCTGCGAATTGATGAAAGAAACGCTCTTCAGCAAGAAATTTACTGTCTTAAAGAGGAGCTTAATGATTTGAATAAAAAACATGAAGCCATGATGGAGGAAGTCAGGTCAACTGACTTAGATCCACTGTGCTTTGGACCATCTGTGAAAAAATTGCAAGATGAAAACTTAAAGCTGAAGGAAACATGTGAGTCTGACAAAGGAGAGAAAGAAGCTCTTTTGGTAAAATTAGAAACCATGGAGAAAATTCTGGAGAAAAATACTGTCTTAGAAAATTCCCTTTCAGACTTGAATGCTGAACTGGATAGCGTCAGAGGAAAGGTAAATGTGTTGGAAGAAACATGTCAGTCTCTACTAGTTGAGAAATCCAATCTTGCTGCTGAGAAGGCCACCTTGTTTTCTCAGTTACAATCCACAACTGAAAAGCTGGAGAGGCTCTCAGAAAAGAGCAACCTATTGGAAAATTCATTATTTGATGTGAATGCTGAACTTGAAGGGTTAAGGATGAAGTCCAGGGTGTTAGAAGATACATGCCAGTCACTTGACCACGAGAAGACCAATATCTTTCAAGAGAAAGAAACCTTAGTTTCACAGATGAACATCACTCATCAAACACTGAAAGATCTTGAGAAACTGCACAGTGAATTGGAGTCAAAGCATTTGGAACTGAAAGGAGAAAGAGAGTCTGCACTTCAAAAGGTAGAAGAACTTCTAGTTTCCCTATATTCTGAGAGGGAAGAGCATTCCAGAGTTTTGAAATTGAATGAAGATGAATTGGCTGAGAAGGAATTACAAATTCATATTCTACAAGAAGATACCAATTGCAAGAAAAAGGATTATGAGGAGGAACTGGACAGAACTATACACGCTCAAATTGAAATTTTCATCTTGCAGCAATGTATTGACGATCTGGAAAAAAAGAACTTCTCCATTCTGGTTGAGTGTCAGAGACTATTGGAGGCTTCCAAAATGTCAGACAGGATGATATCTAAATTGGAGACTGAGAATGTTGAAAAGCAGGTTGATGTGAGTTCTCTGTCTGAGAAAATTAAAATACTAAGGGTTGGGTTGATTCAGGTGTTGAAGACTCTTGACCATAACAGTGGGCATTTCTGTGAAGATATGCTTGAAGAAGACCAAATGCTTTTGAACAAGATATATGAAAAACTTCAGGACAGGCAGAAATCTTTTGACACAATTTTCAATGAAGGCCAAAAAATGGCCTTTGAGAATTCAATTCTGATTACATTCCTTGAGCAGTTGAAACTAAAGGTAGAAAATCTTGTGACACAAAGAGATGACCTTGATGAGCAGTTCAGTATCCAGTCTCAGCAGTTCTTGGCATTGCAAATAGAGGTTCAAGAGATACTGGAGAAGAACCAAGAGTTGAAGTTGACAATAAGCAAAGGAGAAGATAGAATGGAAGTAATGACAGCTGAAATAGGCAACCTAGAGAAGAAGCTGTCAGACATGGAAAAAAATCACAACAATTTACAGGAGGATAGTCACAAAATATTGGAAGAGAAGAAGTCCTTGATGAGAAGTTTTCTAGATCTGGGTGAAGTGAAAAGTAACTTGGAAGAAGAAATATGTTTCATGATCCATGAGACAATAGCTCAGTCTAATATTTCCCTGATTTATGAGAATATTATCTTTGAAAAACTCCTGGAACTCAAAGAGCTAGGTGAGGATCTTGATAAACATTGTTCAGCAAATAATGACCTCAAGGAGAGATTAAAAGTTATGGTGGGAAAGTTAGAGAATGCAGAAATGGATAATTCACATCTTAAAGAGTCATTTATAAAGTCAAATGTTGAACTGCATTTAGTTCAATCTATCAATGATGAATTAAGTTGTCAGATTAGGGATGAAAGGGAAATGTTGAATCTAAAGGAAAATGAGCTTTTGGAAGCAGCTGAGATGTTTCATGTTTTACATGCTGAGAAAAAAGAATTTCAAAGAATGGTGGAAGATCTGAAGATTAAGTATGATGAAGCAAGGGTGATGCTCGAAGAACAGGCTAATCAAATTTTGAAATTGTCCTCAGACAAGGACCGTCAAGATGAAGAGATAATTTGCCTGTGCAAAGTGAACCAGAAGTTGGAGTCTGAAATAGGGCACCTACGTCAAGAGCTTGGAGAAACTAAACTGAGGGAAAATAAGCTAAGTTATGAAGTACTTAAGGGAAGAAATGAGATTGAACAATGGGAAACTCAGGCTTCAACACTCTTTGCTGAGCTGCAGATTTCTGCCGTGAATGGAACATTATTTGAAGGAAAAGTCTCTGAGCTAGCGGATGCTTGTGAGAATCTTGAACACAGAAACTACTCCAAAGACATGGAAAGCGAACATCTGAAAGAAAGAGTTAGCAAGCTGGAAATTGAAAATGGAAGACTATCTGGTCAATTAGCTGCTTATGTCCCTGCTGTCAGTGCTTTGAATGATAGTATAACAGCTCTGGAGATGCAGACTCTTTCACATGAAAAACCTGATGAAGAAACAAAGGTTAAAGTATTGGTGGGTAATGAATTCACTGAAGATGGTCAACAAACAGACGAAGATAAGACTGTTATTGCACCAGATGCACTCCCTGGCTTCCATGACATGCAGAGAAGGATCAATGCTATTGCAGTAGTAGTAAAGCAGTTAAATGAAAGTTTCAAACTCAAGAATGAAACTAGAGAGATTCAAGAGTTAAAATCTGGAATTACCCAAGCAAGCAAGCATGTTACTCAAGACCAAGGAAAGTCCTCGGTTACAGAGATCGAAGTTTTGCCTAAAGACATCATGCTAGATCAAATATCTGAATGTTCATCGTATGGGATAAGTAGGAGGAGAGAAATTCTTGAGGCTGATGATCAAATGCTTGAGTTGTGGGAAACAGAAGATAAGGATGGCAGTATCGGAAAGCAAATCGAAAAGACACAAAGGATGGCTTCTGAAGCTGCAGGCAATCAACAAAGAGGAACAACGAAGGAACCCAAAAATAAATATCCTTCAAAAGACTTCTTGGTGGAAAAAGAGTTGAGTGTGGACAAGTTAGAGATCTCAAGAAGATTGACAGTGCAACGGGATGAAGGGAACCAATCGAAGATTTTAGAGAGACTCGATTCTGATGCACAGAAGTTGACAAACCTTCAAATCACTGTACAAGATTTGATGAAGAAGGTAGAGGTTAATGAGAAGAACACAAAAGGAAAAGGTGTTGAGTTTGATGAAGTAAAAGGGCAACTTGAAGCATCCCAGGAGACCATCACAAAGTTGTTTGACACCAACAAGAAGTTGATGAAGAATGTGGAAGAGGGTACCTTGTCATCTGCCGGGAAGAGTGCAGGAGAGTCAGAGGAAAGTGGAAGTGTCAGCAGAAGGAGAGTCTCAGACCAGGCAAGGAGAGAATCAGAAAAGATAGGACAACTGCATTTTGAGGTGCAGAGGTTGCAGTTTCTACTGCTGAAACTTGGTGATGGAAAAGAAAGCAAAGAGAAAACGAAAACCAGTGATCGAAGTCCAAGAGTGCTTTTGCGAGATTATCTCTATGGTGGGACGAGAAGCAACAACCAAAAGAAGAAAAAGCTACCATTTTGTTCATGTATGCGACCTCCCACCAAGGGAGATTGA 5442 0.3964 MATLSHANSRRMYSWWWDSHISPKNSKWLQENLTDMDAKVKQMIKLIEEDADSFARRAEMYYKKRPELMKMVEEFYRAYRALAERYDHATGVIRHAHRTMSEAFPNQVPMMLTDDLPTVSPPETEPHTPEMRHSSRSFLDLDEPQKEASAHFHVIKKNGGYSGEPDSALNKTGLKQLNDLYIPGEPENLTQFAERNARRGLNFFETQESSELTNGSNNTRSHFSSESERVTKAETEILALKKAIAKLEDEKEAGLLQYQQCLEKLSNLQLELSGAQENSQILDQRASKAETEIQALKETQIKLQAESEDSLLQYQECLEKIAKLEESISSAQTEAGELNERANRAENEAESLQQDLARVEAEKEAIIVQYKHCSETLSKLEERLEEAQENARKTKEHATVAENEIGALKLQVTKLNEEKEEAALRYQQCLEMISGLEYKLSCAEEEVRRLNSKIDDEVEKLQSSEKKCLLLETSNHNLQSELQSLAQQMGSQSEELNEKQKELSRLWGCIQEERLRFIEAETAFQTLQQLHSESQEELRSLAAEFHSKVDILGNVESRKQALEDEIHRVSEENKILNDVKISSSLSIKNLQDEILNLRETIEKLEQEVELRIDERNALQQEIYCLKEELNDLNKKHEAMMEEVRSTDLDPLCFGPSVKKLQDENLKLKETCESDKGEKEALLVKLETMEKILEKNTVLENSLSDLNAELDSVRGKVNVLEETCQSLLVEKSNLAAEKATLFSQLQSTTEKLERLSEKSNLLENSLFDVNAELEGLRMKSRVLEDTCQSLDHEKTNIFQEKETLVSQMNITHQTLKDLEKLHSELESKHLELKGERESALQKVEELLVSLYSEREEHSRVLKLNEDELAEKELQIHILQEDTNCKKKDYEEELDRTIHAQIEIFILQQCIDDLEKKNFSILVECQRLLEASKMSDRMISKLETENVEKQVDVSSLSEKIKILRVGLIQVLKTLDHNSGHFCEDMLEEDQMLLNKIYEKLQDRQKSFDTIFNEGQKMAFENSILITFLEQLKLKVENLVTQRDDLDEQFSIQSQQFLALQIEVQEILEKNQELKLTISKGEDRMEVMTAEIGNLEKKLSDMEKNHNNLQEDSHKILEEKKSLMRSFLDLGEVKSNLEEEICFMIHETIAQSNISLIYENIIFEKLLELKELGEDLDKHCSANNDLKERLKVMVGKLENAEMDNSHLKESFIKSNVELHLVQSINDELSCQIRDEREMLNLKENELLEAAEMFHVLHAEKKEFQRMVEDLKIKYDEARVMLEEQANQILKLSSDKDRQDEEIICLCKVNQKLESEIGHLRQELGETKLRENKLSYEVLKGRNEIEQWETQASTLFAELQISAVNGTLFEGKVSELADACENLEHRNYSKDMESEHLKERVSKLEIENGRLSGQLAAYVPAVSALNDSITALEMQTLSHEKPDEETKVKVLVGNEFTEDGQQTDEDKTVIAPDALPGFHDMQRRINAIAVVVKQLNESFKLKNETREIQELKSGITQASKHVTQDQGKSSVTEIEVLPKDIMLDQISECSSYGISRRREILEADDQMLELWETEDKDGSIGKQIEKTQRMASEAAGNQQRGTTKEPKNKYPSKDFLVEKELSVDKLEISRRLTVQRDEGNQSKILERLDSDAQKLTNLQITVQDLMKKVEVNEKNTKGKGVEFDEVKGQLEASQETITKLFDTNKKLMKNVEEGTLSSAGKSAGESEESGSVSRRRVSDQARRESEKIGQLHFEVQRLQFLLLKLGDGKESKEKTKTSDRSPRVLLRDYLYGGTRSNNQKKKKLPFCSCMRPPTKGD 1813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01866 1813 Coils Coil 1166 1200 - -
Vian3g01866 1813 Coils Coil 524 544 - -
Vian3g01866 1813 Coils Coil 314 467 - -
Vian3g01866 1813 Coils Coil 552 579 - -
Vian3g01866 1813 Coils Coil 657 677 - -
Vian3g01866 1813 Coils Coil 1222 1242 - -
Vian3g01866 1813 Coils Coil 807 841 - -
Vian3g01866 1813 MobiDBLite consensus disorder prediction 1586 1601 - -
Vian3g01866 1813 Coils Coil 1306 1326 - -
Vian3g01866 1813 MobiDBLite consensus disorder prediction 206 224 - -
Vian3g01866 1813 SUPERFAMILY Tropomyosin 398 646 - -
Vian3g01866 1813 PANTHER PROTEIN NETWORKED 4A 284 386 - -
Vian3g01866 1813 MobiDBLite consensus disorder prediction 1724 1741 - -
Vian3g01866 1813 Coils Coil 937 957 - -
Vian3g01866 1813 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 13 93 IPR011684 GO:0003779
Vian3g01866 1813 Coils Coil 853 880 - -
Vian3g01866 1813 Coils Coil 1026 1046 - -
Vian3g01866 1813 MobiDBLite consensus disorder prediction 1710 1741 - -
Vian3g01866 1813 Coils Coil 587 646 - -
Vian3g01866 1813 Coils Coil 1257 1298 - -
Vian3g01866 1813 Coils Coil 1497 1517 - -
Vian3g01866 1813 Coils Coil 230 250 - -
Vian3g01866 1813 SUPERFAMILY Tropomyosin 219 421 - -
Vian3g01866 1813 Coils Coil 1651 1671 - -
Vian3g01866 1813 MobiDBLite consensus disorder prediction 206 228 - -
Vian3g01866 1813 Pfam KIP1-like protein 14 87 IPR011684 GO:0003779
Vian3g01866 1813 MobiDBLite consensus disorder prediction 1765 1779 - -
Vian3g01866 1813 Coils Coil 1061 1116 - -
Vian3g01866 1813 Gene3D - 307 476 - -
Vian3g01866 1813 Gene3D - 682 861 - -
Vian3g01866 1813 Coils Coil 688 771 - -
Vian3g01866 1813 MobiDBLite consensus disorder prediction 1765 1813 - -
Vian3g01866 1813 MobiDBLite consensus disorder prediction 1584 1606 - -
Vian3g01866 1813 Coils Coil 475 502 - -
Vian3g01866 1813 Coils Coil 258 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01866 Vian-Chr3 21618567 21625256 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01866 - - gmx:100782563 2361.64
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g01866 3 21618567 21625256 Vian3g01866 3 21618567 21625256 ECH
Vian2g02133 2 41197018 41200570 Vian3g01866 3 21618567 21625256 PCT