Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01700 ATGGGGAAAACTACCTTAGCGACCGCCGTCGCCGCCTTCCTGCTCCTCCTTCTGGTGCCCCCTTCCACGGCGGAGATAAAAACCCTCACCATAACCTCCGACACCCGCCCCATGATCCTCTTGGAAAAATTCGGGTTCACGCACACTGGCCACGTGTCGATCGCGGTCTCCTCTGTGTCCGTTGTGGCGTCGTCGGGGTCGCAACCGGACCCTTCCCGGTTAGGGTTCTTCCTCCTGAGCGAAGAGTCTCTTCTCCAAGTCCTAATCGAGATCCAGCAAAACCCCAGGTTCTGCGTCCTGGACTCGCGCTACATCAAGGGCCTCCTCACCTTCCGGGAACTTTCTCCCCCACCCGCCGCCTCTGTCAACCGCATCTTCCCCGTTACAATCGCCAATGAATACAGTCTCTTCTTTGCCAATTGCGCGCCGGAAACCTCCGTCTCCATGGCGGTCCACACGGAGCTCTACAACCTCGACCCCGACAACTCCCGGGACTACCTCTCCGCCGGCCAGACCCAGCTTCCCTCCCTTTTCTTCCTATTCTCCGTTGCCTACTTCGCCTTCCTCGCCCTCTGGCTCTACCTCTGCCACTCCAACCGCCGCTCCCTTCACCGGATCCACCTCCTCATGGGTGCCCTTCTCCTCATGAAGGCCCTCAACCTGCTCTGCGCCGCCGAGGACAAGCACTACGTCAAAATCACCGGCACACCCCACGGCTGGGACGTCCTCTTCTACATCTTCCAGTTCATTCGCGTCGTCCTCCTTTTCACCGTCATCGTCCTCGTCGGCACTGGCTGGTCCTTCCTCAAACCCTTCCTCCAGGAGCGCGAGAAAAAGGTCCTTATGATCGTCATCCCCCTCCAGCTCCTCGCGAACGTCGCCTCCGTAGTCATCGGTGAAACCGGCCCCTTCATCAAGGACTGGGTTACTTGGAACCAGGTCTTCTTGCTCGTCGACATCGTCTGCTGCTGCGCCATAATCTTCCCTATTGTCTGGTCCATTAGGTCTCTCAGGGAAACTTCCAAAACCGACGGAAAAGCCGCCAGGAACCTGGCCAAGTTAACCCTCTTCAGACAATTCTACATCGTTGTCATTGGCTACTTGTACTTCACGCGCATTGTTGTCTTTGCACTTAAAACCATTGCGGCGTACAAGTACCAGTGGGTGAGCAATCTCGCCGAGGAGACTGCTAGCCTCGCCTTTTATGTGGTCATGTTCTACATGTTTAGGCCTGTGGAGAGGAATGAATACTTTGTCCTCGATGAGGAGGAAGAAGAGGCCGCGGAGATTGCCCTCAGGGACGAAGAATTTGAGCTTTGA 1320 0.5659 MGKTTLATAVAAFLLLLLVPPSTAEIKTLTITSDTRPMILLEKFGFTHTGHVSIAVSSVSVVASSGSQPDPSRLGFFLLSEESLLQVLIEIQQNPRFCVLDSRYIKGLLTFRELSPPPAASVNRIFPVTIANEYSLFFANCAPETSVSMAVHTELYNLDPDNSRDYLSAGQTQLPSLFFLFSVAYFAFLALWLYLCHSNRRSLHRIHLLMGALLLMKALNLLCAAEDKHYVKITGTPHGWDVLFYIFQFIRVVLLFTVIVLVGTGWSFLKPFLQEREKKVLMIVIPLQLLANVASVVIGETGPFIKDWVTWNQVFLLVDIVCCCAIIFPIVWSIRSLRETSKTDGKAARNLAKLTLFRQFYIVVIGYLYFTRIVVFALKTIAAYKYQWVSNLAEETASLAFYVVMFYMFRPVERNEYFVLDEEEEEAAEIALRDEEFEL 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01700 439 Pfam Lung seven transmembrane receptor 134 415 IPR009637 GO:0016020
Vian3g01700 439 Coils Coil 420 439 - -
Vian3g01700 439 PANTHER LUNG SEVEN TRANSMEMBRANE RECEPTOR 12 427 IPR009637 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01700 Vian-Chr3 19044149 19045468 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01700 K22985 - gmx:100815429 708.368
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g01700 3 19044149 19045468 Vian3g01700 3 19044149 19045468 ECH
Vian2g02306 2 43455505 43456827 Vian3g01700 3 19044149 19045468 PCT