Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vian3g01600 | ATGGGGAACCAAGTCTCACTTCGTCCCTCAGATGCCAGGGGCAAAATCGTCTTGTGGGACGGTTCCGTGCATGAAATTGAGCAATCGGTGACGGTGGCGGAGCTCATGCTGGAGCACCCAGAACAGGTGGTGGTTGAGTTGCATTCGGCAGTGAACCAGAAAAGGCCAACGCCATTGCCGGCTGATAACAAGTTAGAAACAAACAAGGCGTATCTGATGCTTCCCGTGAGGCGAGGGAAGCCCGTTGGGTTAAGCGGGGAAGAAGCTCGACGCATTCTCTTCATCCTTAATTCTGCTCTGCATTCAAAGTCTCTTGTGGGGTCGTCAAAGTTTGTTCCTTGGCTTACGCGTTTGTGCCAGAACACTACGATTGTGGAACCAGGGAGAAAGGAAGAGGAAAGAGAGAAGAACGAAGAAAGGTGTCAGTTTTCAGAGCTTCTGCCGGAAATTCTAGAAGCGAGGCCGGAGTATTTGAATAGGCAATTGTCGGGAAAAGGGTGGAAACCTACTTTGGACACCATTAAGGAGAAGAACATTGACAGAAAACACACTCATTGGTTGTTCCTCAGGACTTTCTAG | 579 | 0.4957 | MGNQVSLRPSDARGKIVLWDGSVHEIEQSVTVAELMLEHPEQVVVELHSAVNQKRPTPLPADNKLETNKAYLMLPVRRGKPVGLSGEEARRILFILNSALHSKSLVGSSKFVPWLTRLCQNTTIVEPGRKEEEREKNEERCQFSELLPEILEARPEYLNRQLSGKGWKPTLDTIKEKNIDRKHTHWLFLRTF | 192 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vian3g01600 | 192 | Pfam | PADRE domain | 1 | 176 | IPR025322 | - | |
| Vian3g01600 | 192 | PANTHER | DUF4228 DOMAIN PROTEIN-RELATED | 12 | 176 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Vian3g01600 | Vian-Chr3 | 17574486 | 17575064 | Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Vian3g01600 | - | - | gmx:100784884 | 306.99 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Vian3g01600 | 3 | 17574486 | 17575064 | Vian3g01600 | 3 | 17574486 | 17575064 | ECH | |
| Vian2g02836 | 2 | 49246223 | 49246801 | Vian3g01600 | 3 | 17574486 | 17575064 | PCT |