Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01595 ATGGGGACTGATGAAGTACCAATGGACGACAAGGCGAAGAGGATGAGAGATCTGCTATCGAGTTTCTACTCACCAGACCCTTCCAACTCCAACACCACCTCCAGAAACGCTTCCCTTGACGATATCAATTCCACCTCCTTCGATCCCGATCAGTACATGAACATCCTGGCGTACAAGTCCAATTTGGAAGGGCTGCTTCAACGTCACGTTGAAATGGCTGCTGAAATAAAGAATCTCGACACCGACTTGCAAATGCTGGTCTACGAGAATTACAACAAGATGAAGAGTAACATTTCAGGGATGGAGGCGAACATGGAACAGCTTCTTGAGAAGATCATGTCTGTGCAGTCAAGAAGTGACAATGTCAACACTTCTTTATTTGACAAAAGGGAGCATATTGAGAAGGTGCATCGGACTTGTAATCTTCTTCGTAAAGTTCAGTTCATATATGATCTACCCGATAGACTAGGTAAGTGCATCAAGTCAGAGGCTTACGCAGATGCCGTCAGGTTCTATACTGGAGCAATGCCAATTTTTAAGGCATATGGAGATTCATCATTCCGGGATTGTAAGCAAGCTTCTGAGGAAGCAATGACTATCATAGTAAAAAACTTACAGGGGAAGCTATTTTCGGATTCTGAATCAATACAAGTGAGAGCTGATGCAGCAGTGCTTCTTAAGCAGTTGGATTTTCCGGTGGATAATTTAAAGACGAAGTTATTTGAAAAGTTAGAACAATCTATTACAGACATTCGACTTAACCCTATAGAAATAAACAATGCATCCAGGGACTATTCTGCTCACGAGGCAGCTGTTCATGAATTTGTGGAGGCAGTTCGTGCATTTAGAGTTATATTTCCTGATTCCGATGAACAATTGGTTAAACTTGCTGAAGACTTAGTCACCAAGAACTTTGTAATTGCTGAGGAATATGTAAAGACACGGATTTGCCCAGATGATCTACTTGGTGTTCTTCGAGTTATCTGGAATGATGTGCTCCTAATAGATGAAGTCTTGCAGGAAGCAGCTCTCTCAAACCATTCTCTTGAGGCTGCAAAGGTTGTCCTCATGTCATTTGTTAGAAGTGAATTTTCTCATCTTCTGCAAGACATCTCAGGCTCCCTCTTACAAATCCTGAAAAAGGATGGTGCAGAACAGTGCTCTCTTGATGTTGTTCTTGATGCAAGTACAAAATCAGTTCTTCAAGGAAGCTTGAATGTGTTGTTGGATTTCCGCAAAATTTTAGATGAAAACTCTGGGATCGTAGTTAGATTAAGAGAGTTAATTATTGATTGGGTTCAAGAAGGACTTCAGGACTTTTTTACGAAATTGGAGGATCAGTTCCTTCTATTATCAGGTAGAAGTAACTCATCTATTCAAGCACACGGTTTGGCAGAGGGTGCTCAAGGGGATAAAGCTTTTGCTGGCCTTGTCCTTGTGCTGGCCCAGTTGTCTGCTTTCATTGAACAAACTGTCATCCCAAAAGTCACCGAGGCAAGGGAAATAGCTTCTTCCTTTTCTGGGGGTAGCATTAGAGGTCATGAATCCGGACCTGCCTTTGTTCCTGGAGAAATATGTCGAAAATTTCGGTCAGCTGGTGAAAAGTTCCTGCACTTGTACGTAAATATGAGAACTCAGAGGATATCATTTCTCCTGAAGAAGAGGTTTACCACCCCTAATTGGGTTAAGCATAAAGAGCCAAGAGAAGTTCATATGTTTGTTGATCTGTTTCTTCAAGAGCTTGAAGGTATAGTTAAGGAAGTGAAGCAGATATTGCCTCAAGGTAGACGTAAGCACCGCAGGACTGATAGTAATGGAAGTAGTGCTTCCTCAAGGAGCAACCCATTACGGGAAGAGAAACTGGGTAGGTCGAACACTCAAAGGGCAAGGAGCCAGCTTTTGGAAACGCATCTGGCAAAGTTGTTTAAGCAGAAAGTTGAAATTTTTAACAAAGTAGAATATACACAGGAGTCTGTTGTTACAACTTTATTCCTAAGGATCCCTTTAAGGGATATAGTTGAAGATGAAGCTGCCATCGACTTCTTGCTTGATGAGGTGATTGTTGCCACCGCAGAACGGTGCCTAGATCCGGTTCCATTGGAGCCTCCCATATTGGACAAACTTATACGAGCAAAGTTGGCTAAAACCGAGCAGCAAAATACAGATTCTTCTTCATAA 2178 0.421 MGTDEVPMDDKAKRMRDLLSSFYSPDPSNSNTTSRNASLDDINSTSFDPDQYMNILAYKSNLEGLLQRHVEMAAEIKNLDTDLQMLVYENYNKMKSNISGMEANMEQLLEKIMSVQSRSDNVNTSLFDKREHIEKVHRTCNLLRKVQFIYDLPDRLGKCIKSEAYADAVRFYTGAMPIFKAYGDSSFRDCKQASEEAMTIIVKNLQGKLFSDSESIQVRADAAVLLKQLDFPVDNLKTKLFEKLEQSITDIRLNPIEINNASRDYSAHEAAVHEFVEAVRAFRVIFPDSDEQLVKLAEDLVTKNFVIAEEYVKTRICPDDLLGVLRVIWNDVLLIDEVLQEAALSNHSLEAAKVVLMSFVRSEFSHLLQDISGSLLQILKKDGAEQCSLDVVLDASTKSVLQGSLNVLLDFRKILDENSGIVVRLRELIIDWVQEGLQDFFTKLEDQFLLLSGRSNSSIQAHGLAEGAQGDKAFAGLVLVLAQLSAFIEQTVIPKVTEAREIASSFSGGSIRGHESGPAFVPGEICRKFRSAGEKFLHLYVNMRTQRISFLLKKRFTTPNWVKHKEPREVHMFVDLFLQELEGIVKEVKQILPQGRRKHRRTDSNGSSASSRSNPLREEKLGRSNTQRARSQLLETHLAKLFKQKVEIFNKVEYTQESVVTTLFLRIPLRDIVEDEAAIDFLLDEVIVATAERCLDPVPLEPPILDKLIRAKLAKTEQQNTDSSS 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01595 725 MobiDBLite consensus disorder prediction 22 43 - -
Vian3g01595 725 PANTHER UNCHARACTERIZED 6 662 IPR014812 -
Vian3g01595 725 Coils Coil 91 118 - -
Vian3g01595 725 MobiDBLite consensus disorder prediction 593 628 - -
Vian3g01595 725 MobiDBLite consensus disorder prediction 17 43 - -
Vian3g01595 725 Pfam Vps51/Vps67 42 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01595 Vian-Chr3 17494679 17503737 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01595 K20296 - gmx:100818891 1226.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g01595 3 17494679 17503737 Vian3g01595 3 17494679 17503737 ECH
Vian2g02831 2 49191561 49210482 Vian3g01595 3 17494679 17503737 PCT