Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01515 ATGGTTCCAATTTTGTTGTACATCGTTGCTTTCCTTTGTACGTGCGGAGCTATTGCGTTGTCCTTGCTTCACATTTATAAGCATCTTCTCAATTACACGGAGCCTACTTATCAGCGGTTCATTGTTCGTATCGTTTTTATGGTCCCGCTCCTTTACTGGTTGCTGCTTCGTCTATTTGGTTTTGGTTTGGTTGTAGGCCAAAACTGTTTACTTTCTGTATCTGATATGCTTTTGCTGATCATTCGATACAATTACTTTCCCGTTTATGCATTGATGTCATTTTTGTCGCTTGTTCTACCGGTTGGTTCAATCTATTTTAATTCAATCCGGGAAATCTATGAAGCTTGGGTTATTTATAATTTCCTATCTCTATGTCTTGAATGGGTTGGTGGTCCTGGAGCAGTAGTCCTAAGCTTAACTGGACGGATTCTGAAGCCATCATGGTTTCTGATGACTTGTTGCTTGCCTCCAATAGCACTTGATGGGCGTTTTATACGTAAATGCAAGCAAGGGTGTTTGCAATTTGTGATTTTGAAGCCAATTTTAGTTGTTGTTACTCTAGTACTTTATGCAAAGGGGAAATATAAGGATGGAAACTTCAGTCCAAACCAATCATACTTGTACCTTACAATCATCTATACATTCTCCTACACAATGGCTCTGTATGCTCTTGCTTTGTTTTATGTGGCATGCAAGGATCTGCTTCAACCATTCCACCCAGTCCCAAAGTTTATTATAATAAAATCTGTTGTATTCCTGACTTATTGGCAGGGTGTCTTAGTTTTCCTTGCTGCAAAGTCAGAATACGTTAAGGATGCAGATGAAGCTGCTCTACTTCAAGATTTTTTGATTTGTGTTGAGATGCTTGTTGCAGCTGTTGGGCATTTTTATGCATTTCCATACAAAGTGTATGCTGGGGCTAACATAGGTGGATCCCGTGGGTTAACAGCTAGCCTTGCTCATGCTTTGAAATTAAATGACTTCTACCATGATACCGTCCACCAGGCCAGTCTCACTTTTAATATTCTTCTCACATTTGCACCGACATACCATGATTATGTTCTCTACAACCACGGTGAAAGCGGTGAAGAGGGAACTAGGAAGTATAGGTCACGAACTTTTGTTCCAATTGGCCCAGAAATGGACACTGTGAGAAGAAATAAGCATTTGTTTGGAAACAAATCAGCAGATGACATACAGCTCTCAAGCTTTTCTTCTAATAGTAGCGCTGCCTCAAATTCTGGTATCAATGCCGAAGTATCCCATTCTAGTGGAATGAAATCTTCCTTACTCGAGGATGCGTCAAATTCTTTATCTGTGCCCTACGATATGACACTTATTGACTTGGATACACCCAGTTATTCTGAAAAAGTTCCAGCAGCTGATAAAGCTGATACTCGGTGGAAAGCATGTAAGCAGGCACTATCTGCTGCTGTCGCCCATGTCACAAAGTTTGGTAGTGAAAGTAACTACTGGTCCTTTTTGCATTTATTGACACACGCCTTGGCTCATGCTTTGGTTTACCAACAAAGCTTTTGGTCCCACTGGTTTGGGAATGATGTTCCTAGACCCCCCTCATTGGATGTCTCTGATCCAACCCTACCAAAACATCTATGGAGCCCACAAAAGTAG 1632 0.4105 MVPILLYIVAFLCTCGAIALSLLHIYKHLLNYTEPTYQRFIVRIVFMVPLLYWLLLRLFGFGLVVGQNCLLSVSDMLLLIIRYNYFPVYALMSFLSLVLPVGSIYFNSIREIYEAWVIYNFLSLCLEWVGGPGAVVLSLTGRILKPSWFLMTCCLPPIALDGRFIRKCKQGCLQFVILKPILVVVTLVLYAKGKYKDGNFSPNQSYLYLTIIYTFSYTMALYALALFYVACKDLLQPFHPVPKFIIIKSVVFLTYWQGVLVFLAAKSEYVKDADEAALLQDFLICVEMLVAAVGHFYAFPYKVYAGANIGGSRGLTASLAHALKLNDFYHDTVHQASLTFNILLTFAPTYHDYVLYNHGESGEEGTRKYRSRTFVPIGPEMDTVRRNKHLFGNKSADDIQLSSFSSNSSAASNSGINAEVSHSSGMKSSLLEDASNSLSVPYDMTLIDLDTPSYSEKVPAADKADTRWKACKQALSAAVAHVTKFGSESNYWSFLHLLTHALAHALVYQQSFWSHWFGNDVPRPPSLDVSDPTLPKHLWSPQK 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01515 543 Pfam Organic solute transporter Ostalpha 7 50 IPR005178 -
Vian3g01515 543 Pfam Organic solute transporter Ostalpha 85 304 IPR005178 -
Vian3g01515 543 SMART Solute_trans_a_2 6 304 IPR005178 -
Vian3g01515 543 PANTHER ORGANIC SOLUTE TRANSPORTER-RELATED 6 422 IPR005178 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01515 Vian-Chr3 16548630 16553506 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01515 - - vun:114192346 766.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian2g02753 2 48458935 48463225 Vian3g01515 3 16548630 16553506 PCT