Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01181 ATGCTTGTTGATATTTTGAGGAAAAACAAAGTCAACACTGATGGCATTTGCTTTGATACGGAGGCAAGAACTGCTTTGGCTTTTGTGACATTGAGGAAGGATGGAGAGAGGGAGTTCATGTTTTACAGAAATCCCAGTGCAGATATGTTGCTGGCGGAGTCAGAATTGAATATGGGTTTGATCAAGAAGGCTAAGGTATTTCATTATGGATCCATTAGTCTGATATCAGAGCCATGCAGATCAGCACACTTGGCTGCAATGAAAGTTGCTAGAGAAAGTGGTGCTTTGCTCTCTTATGATCCAAATGTGAGGCTTCCTTTGTGGCCTTCTAAGGAGGCTGCTAGGTCTGGAATCAAGAGCATATGGTTTGATGCCGACTTCATCAAGGTGAGTGATGACGAAGTTAAATTCCTAACAGAAGGTGATCCTGAGAAGGAGGATGTTGTGATGTCCCTGTGGCACGACAAATTGAAATTGCTTCTAGTCACTGATGGAGAGAAGGGTTGCAGATATTTCACCAAGAACTTCAAAGGAAGAGTAAATGGATTTTCAGTGAAGGCAATTGACACAACTGGTGCTGGTGATTCTTTTGTGGGTGCACTTCTCACAAGTGTGGCCAGGGACACTTCCATATTTGAGAATGAACAAAAATTGAGAGAGGCTTTGACGTTTTCGAATGCTTGTGGAGCAATTTGTACAACAGCGAAGGGTGCAATTCCTGCACTTCCAACCGTAGCAGAGGCTTCCAAATTTATTTCCAACTCTAAACCTTCATAG 777 0.4286 MLVDILRKNKVNTDGICFDTEARTALAFVTLRKDGEREFMFYRNPSADMLLAESELNMGLIKKAKVFHYGSISLISEPCRSAHLAAMKVARESGALLSYDPNVRLPLWPSKEAARSGIKSIWFDADFIKVSDDEVKFLTEGDPEKEDVVMSLWHDKLKLLLVTDGEKGCRYFTKNFKGRVNGFSVKAIDTTGAGDSFVGALLTSVARDTSIFENEQKLREALTFSNACGAICTTAKGAIPALPTVAEASKFISNSKPS 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01181 258 SUPERFAMILY Ribokinase-like 2 251 IPR029056 -
Vian3g01181 258 Gene3D - 1 257 IPR029056 -
Vian3g01181 258 FunFam Probable fructokinase-2 1 256 - -
Vian3g01181 258 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 189 202 IPR002173 GO:0016301
Vian3g01181 258 CDD bac_FRK 1 239 - -
Vian3g01181 258 PANTHER HEXOKINASE FAMILY MEMBER 1 251 - -
Vian3g01181 258 Pfam pfkB family carbohydrate kinase 2 244 IPR011611 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01181 Vian-Chr3 13094825 13096267 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01181 K00847 - gmx:100775586 470.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g01181 3 13094825 13096267 Vian3g01181 3 13094825 13096267 ECH