Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g01178 ATGGTAGTTACGAGTTGGTGTTCATCTTCGTGGCTGCCTCTGTCACTACGGCTGCCATGGAATTTGAAGGCAGCAAGAATGTCACTGTCACTGAAATTGAAATGTGAAGCGTTTTCTAAATACTCTTGTTGTCTTGTTCACAACGACCAAGCCGATTTGCAAGCTCTCTTACAGATTCTTCCATCTGATTTGCATCAAAGTCTCCTTGATCAACCTAATCGTTCTCAACTTCTGGAGGTTGTATTGGATTTGGGTCGTTTTCCAGAAGCACGCTATTTAGGAGAGCATGGACGCCACTGTTTAAGGAACACAGAGGTAACTGTGAAGGAGTTGGAATATGCTGAACAAGCTGTTGGAGAGTTTGGCAAGGACAATAGAGCTGGAATTGAGGGTACTTTGCACAGAGTATCTGCAATTAGGAGTAGGAATGGTCACATAGTTGGCTTGACTTGTCGTGTGGGAAGAGCAATCACTGGCCAGATTGACATGGTTTATGACCTGCTTCAATACGGGAAGAGCATTTTGTTTGTTGGAAGGCCTGGGGTTGGCAAAACTACTGTTATGCGTGAAATTGCTCGGGTGCTGTCTGAAGAGTTTCACAAAAGAGTGGTGGTTGTTGATACCAGCAATGAAATTGGGGGTGATGGCAATATCCCACATGCAGCAATCGGTGGAGCACGAAGAATGCAGGTGCGGGAGCCATCAATGCAACACAGAGTGATGATTGAGGCAGTGGAAAATCACATGCCTGAGGTGATTATAGTTGATGAGATTGGCACCGAAGCTGAAGCTCACGCTTGCCGATCAATTGCCGAGCGTGGGATCATTCTTATTGGGACTGCTCATGGACAGAAGCTTGAGAATATCATCAAGAATCCTACCCTTTCTGATCTGATTGGCGGAATAGAAATTGTTACTCTGGGAGATGCAGAAGCCAAGGCAAGAAATTGTCTGAAGACAGTTATTGAGAGGAAAGCACCTCCAACATTTGATTTCTTAATTGAGATGAGAGATAGACACTACTGGCTCACACATCAGACTGACAAAAGTGTAGATATGTTGCTTCGGGGAAAAAGTCCACAGGTTGAGGTAAGAAGAAAAGATGAAAAGTGTAAGGTCGTGATAGAAAAATCTAAGGCATACGATAAATGCCTATGA 1158 0.4421 MVVTSWCSSSWLPLSLRLPWNLKAARMSLSLKLKCEAFSKYSCCLVHNDQADLQALLQILPSDLHQSLLDQPNRSQLLEVVLDLGRFPEARYLGEHGRHCLRNTEVTVKELEYAEQAVGEFGKDNRAGIEGTLHRVSAIRSRNGHIVGLTCRVGRAITGQIDMVYDLLQYGKSILFVGRPGVGKTTVMREIARVLSEEFHKRVVVVDTSNEIGGDGNIPHAAIGGARRMQVREPSMQHRVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGIILIGTAHGQKLENIIKNPTLSDLIGGIEIVTLGDAEAKARNCLKTVIERKAPPTFDFLIEMRDRHYWLTHQTDKSVDMLLRGKSPQVEVRRKDEKCKVVIEKSKAYDKCL 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g01178 385 SMART AAA_5 170 309 IPR003593 GO:0016887
Vian3g01178 385 CDD AAA 165 260 - -
Vian3g01178 385 Pfam Sporulation stage III, protein AA 145 299 IPR045735 -
Vian3g01178 385 Gene3D - 143 356 IPR027417 -
Vian3g01178 385 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 140 290 IPR027417 -
Vian3g01178 385 PANTHER KINASE-RELATED 49 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g01178 Vian-Chr3 13082430 13087011 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g01178 - - gmx:100817880 642.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g01178 3 13082430 13087011 Vian3g01178 3 13082430 13087011 ECH