Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00811 ATGGAATTAAAAGAGAAAATAGTGGAAAGGGTTCCCTTCAGATCACTAACGAACACTGGAAGCAATCATAACTCGGTGACTGTTTCTGCTACAGAAAGTATGAATGATGCCGGTATTTGTGGGCAGATCATCTCAAACAAGTGCACTAAACCTTCTCAGCATACTAGTAGAGAACAAAAGAGGAGCTGGGACATGGTTGTAGACACTGCTTCTCTTGTGAACAATGAGTCAAGAAAAGCTTTGCAGCTTCTACAAGGTCTCAAAGGGACTCGTTTAATCATTCCAAAATCGGTCATAAGGGAACTAGACTCTATGAAGCAACAATTTAGACTTTTCAGAACAACTTCCGAGGCTTCTTTGGCATTAGAATGGATTAAAGAATGCATGGAGAAAACAAGCTGGTGGATTCATATCCAAAGCTCGATGGAAGAGTGCAGGCTGACAGTTCCAACCCTTTCAAATAAATGTGCTTCACCTGCTGTCGAAGATCACATCCTCGAATGTGCTCTTCAGTATAGAAAAATGGAGAATGTTGGACAACTTCTCCTACTTAGTCATGATGTTACATTGAAAACAAAATCCATGGCCAAGGGGTTGCTGTGCGAGACAGTGCAACAATTTCGCCAGAGTTTAGTAAACCCCTTCTCTGAGAGGTTCATGTGGCCCAAGAGCTCTCCTCGAGGACTGACTTGGTGTTGCCAAGATGATTTAGTTTTAAGGGAGAAATATTGTGGATTGCCATCAAAGGCTGGTTTGAAGCTCATCGCTGAGCAGTTTTTACACTTTCATTGA 792 0.4205 MELKEKIVERVPFRSLTNTGSNHNSVTVSATESMNDAGICGQIISNKCTKPSQHTSREQKRSWDMVVDTASLVNNESRKALQLLQGLKGTRLIIPKSVIRELDSMKQQFRLFRTTSEASLALEWIKECMEKTSWWIHIQSSMEECRLTVPTLSNKCASPAVEDHILECALQYRKMENVGQLLLLSHDVTLKTKSMAKGLLCETVQQFRQSLVNPFSERFMWPKSSPRGLTWCCQDDLVLREKYCGLPSKAGLKLIAEQFLHFH 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00811 263 CDD PIN_Smg5-6-like 66 210 - -
Vian3g00811 263 PANTHER TRANSMEMBRANE PROTEIN 18 4 256 - -
Vian3g00811 263 Gene3D - 59 212 - -
Vian3g00811 263 Pfam PIN domain 65 204 IPR002716 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00811 Vian-Chr3 8517094 8518152 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00811 - - var:108324357 533.487
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00811 3 8517094 8518152 Vian3g00811 3 8517094 8518152 ECH