Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00809 ATGGGTGGTTCCGTTTTCGCTCACTTCCTCCTTCTCCCTTCCACTTCTTCGCCCTCTCTTTCCACTCTATTCCCATCTAAGCTCAATGACTCTGTTCCGTTCACCCTTTTCTGCAACCAATTCCCTTCCAAAGTCTCTACTTCCTCCCCTTCCCAATTCTATCCTCGTCCTTACTCATGTTCTGTAAAAAAGGTAAATGCCTTCGGAATTCAGCAAAAAGCTTCCATACGACATGGAGACAATCTTGATGCAGTGAAGAGCGGGATTTTGCTGCAGAAGTTTCAAAGGAAAATGCCAACAGAATTCCTTAGTACCCTTTTCAACAAACAATTTACAAGATTTTCAGTGAATGACTTTACAACCAAACATCTTGAAGATGGTGCAAGATCATCTAAATGGGTTTCAGCATTCTTGTTTGGACAAACTTTATCAGTGATTTCTCCTGATGTTTCTTATGCAAGCAGCTCAATGAAGATAAATGAGTTATATGAGGTTGGAGAATTGTTTGATTTAAGCATCCAACTAATATACTTGGTATTGCTACTGAGTTTGCTAGGGACTGGGACCTTTTTTGTGATTCGCCAAGTTCTTGTCCGCAGAGAACTTGACCTATCTGCCAAAGAGTTGCAGGAGCAAGTCAGAAGCGGTGATGCCGGTGCAACTGAGCTTTTTGAACTTGGTGCAGTGATGCTGCGAAGGAAATTTTACCCTGCTGCAACCAAGTACTTGCTTCAAGCAATTGAGAAATGGGATGGGGATAATCCTGATCTTGCTCAGGTTTACAACGCTCTTGGTGTAAGCTATGTCCGCGATGGAAAAGTTGACAAGGGAATTGCTCAGTTTGAGACAGCTGTGAAGCTTCAACCAGGCTATGTCACTGCTTGGAACAATCTTGGAGATGCCTATGACAGTAAAAAAGATTACAAGTCTGCTTTGAAGGCATTTGAAGAAGTCCTACTATTTGATCCTAACAACAAGGTTGCAAGGCCTAGGAGAGATTCTTTGAAGGGACTTGTTGAAGCAGCCAAAGGAGTTACCGTCACAAAATCAACTGAGAAGAAATAA 1065 0.4225 MGGSVFAHFLLLPSTSSPSLSTLFPSKLNDSVPFTLFCNQFPSKVSTSSPSQFYPRPYSCSVKKVNAFGIQQKASIRHGDNLDAVKSGILLQKFQRKMPTEFLSTLFNKQFTRFSVNDFTTKHLEDGARSSKWVSAFLFGQTLSVISPDVSYASSSMKINELYEVGELFDLSIQLIYLVLLLSLLGTGTFFVIRQVLVRRELDLSAKELQEQVRSGDAGATELFELGAVMLRRKFYPAATKYLLQAIEKWDGDNPDLAQVYNALGVSYVRDGKVDKGIAQFETAVKLQPGYVTAWNNLGDAYDSKKDYKSALKAFEEVLLFDPNNKVARPRRDSLKGLVEAAKGVTVTKSTEKK 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00809 354 SUPERFAMILY TPR-like 220 329 IPR011990 GO:0005515
Vian3g00809 354 ProSiteProfiles TPR repeat region circular profile. 292 325 - -
Vian3g00809 354 ProSiteProfiles TPR repeat profile. 258 291 IPR019734 GO:0005515
Vian3g00809 354 SMART tpr_5 220 253 IPR019734 GO:0005515
Vian3g00809 354 SMART tpr_5 292 325 IPR019734 GO:0005515
Vian3g00809 354 SMART tpr_5 258 291 IPR019734 GO:0005515
Vian3g00809 354 Pfam Tetratricopeptide repeat 263 322 - -
Vian3g00809 354 PANTHER LD24721P 218 341 IPR047150 -
Vian3g00809 354 ProSiteProfiles TPR repeat profile. 292 325 IPR019734 GO:0005515
Vian3g00809 354 Gene3D Tetratricopeptide repeat domain 214 336 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00809 - - gmx:100800455 445.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00809 3 8506773 8510212 Vian3g00809 3 8506773 8510212 ECH