Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00805 ATGGCTCAGCAGAGACAATCGGGAATGGAGAGGCTTGGGGTGAGAGTGGGGGCCCACGATCTGCACCACACCAACGGTTCCGGCGATCACGTCGCTGTCGGGATTCGGGGTGGCGCCGCTCACAAGCAGCCGCGGTCCCGGCGATCGGCGCGATCCGACAGGGGCACGCAACTGTCGGTGGCGGCAATCCTTGTTTTCCTCTTCCTCGTACTTGTCGTCACTGTGCTCGTTTTCTCTTACATTTCTAGAGACGAAATAAGTAACAATGGGGACGACGGTGTTGATTTAAAGAGTGATTCTGATTTTCTTACGAATGTACCTCGGATACAGAAGAAGAAAGTTCTTGACTTTGGGCATGCCTCTGGAGGACATGGTCGAGATTCAAGATATTGGGATAAAGATGATAGGAGAAGGGATGGTGATTATGATGAGGATATGATGGAGCATACAAGTAAGGATCCTGGAGATGAAATTGTCGAAGATGATGATGCTGTAAAGAAGGATCACGACACCAAGTCTTCTCACGATGGCATAAAGCGGAGGGGCGATGGCTTGTATAATGAAGCAGGACGTCAGGAGTTGAAAAGATATGAAGCAGAATATGAGGCTTCTTTGAAGAATCTGAGACACTCCACCGAAGTTGATGTGAAACTGTTGCATGAGACTAACCTTGAAAAGAAAAGTGCGTCGGATGACACTGATGATGAATATGATGATTTTTTTGATTTTAATGATGCTCAATTGGAGAACTCTAGCGATAGCAGAAATATGAGAGGGGAACATTCTACTGCCAATGTGTTAAGCTTGGACAATGAAGTTCAGAAACAGAAAGAATCTAATGATTCTTTTGCTGAGGAAAACAATGATGATGTTACTTCCGAGGATGTTGAAGAAGCGTCTTTCTTGAATAAAAAAAATCCTCATGAGGGGAAAACAAATTCTAAACATGAAAGTATTTTTAATGGACAATCAACTAGAAAATCACATCCTGAAACAAAGAAGAAAGTCAGGCGACGTAAATTTTCAGGATCCTGTGAGATGAAATTGTTAAACTCAACATCACAGCTTGTAGAACCCCTAGAAAGTCGAAAATTTGCAAGATTTAACTTACAGTACACAGAGATGGAAGATAAGCCCCTGGGAGAAGAACAATGGGTTCCCAGATTTGCTGGCCATCAGAGCTTAGAAGAGAGAGAAAGTTCATTTTTGGCCCGGGATCAGAAAATAAACTGTGGTTTTGTTAAAGGTCCTGAAGGGTCTGAAAGTACTGGATTTGACTTGACAGAAGACGATGCAAGTTACATCAGCAGGTGCCACATTGCTGTGATCTCATGCATATTTGGAAATTCTGATAATTTGAGGACCCCAGCCACCAAAACGGTCACTCGATTGTCAAGGAAGAATGTCTGCTTTGTTATGTTTACTGACGAAATTACAGTTCGGACACTCTCTTCAGAAGGGCATGTGCCTGATAGAATGGGTTTCATTGGCTTTTGGAAGTTGGTGGTAGTGAAGAATCTACCATATGATGATATGCGAAGAGTGGGCAAAATACCTAAGTTATTGCCTCATCGACTTTTTCCTTTTGCAAGGTATTCAATTTGGCTGGATAGCAAATTACGGCTGCAGCTTGATCCTTTACTTATCTTGGAGTACTTTTTGTGGCGCAAGGGTTATGAATTTGCAATATCCAATCATTATGATCGGCATTGTGTGTGGGAAGAAGTTGCACAAAACAAGAAGTTGAACAAGTATAATCACACAGTTATAGATCAGCAGTTTTCATTTTACCGGGCTGATGGACTTGAAAGATTTGATGCATCGGATCCAAATAAGCTTCTTCCAAGCAATGTACCTGAAGGTTCTTTTATTATTAGAGCGCACACCCCAATGTCAAATTTGTTTTCTTGTCTTTGGTTCAATGAAATTGATCGGTTCACTCCTCGTGATCAGCTGAGTTTTGCATATACATATCAGAAGCTGAGAAGGATGAATCCAGACAAACCATTTCATCTGAACATGTTCAAGGACTGTGAAAGGAGACACATAGCCAAGTTGTTCCGTCATAGATTGGATGATAAGAGGATACATCATTGA 2097 0.422 MAQQRQSGMERLGVRVGAHDLHHTNGSGDHVAVGIRGGAAHKQPRSRRSARSDRGTQLSVAAILVFLFLVLVVTVLVFSYISRDEISNNGDDGVDLKSDSDFLTNVPRIQKKKVLDFGHASGGHGRDSRYWDKDDRRRDGDYDEDMMEHTSKDPGDEIVEDDDAVKKDHDTKSSHDGIKRRGDGLYNEAGRQELKRYEAEYEASLKNLRHSTEVDVKLLHETNLEKKSASDDTDDEYDDFFDFNDAQLENSSDSRNMRGEHSTANVLSLDNEVQKQKESNDSFAEENNDDVTSEDVEEASFLNKKNPHEGKTNSKHESIFNGQSTRKSHPETKKKVRRRKFSGSCEMKLLNSTSQLVEPLESRKFARFNLQYTEMEDKPLGEEQWVPRFAGHQSLEERESSFLARDQKINCGFVKGPEGSESTGFDLTEDDASYISRCHIAVISCIFGNSDNLRTPATKTVTRLSRKNVCFVMFTDEITVRTLSSEGHVPDRMGFIGFWKLVVVKNLPYDDMRRVGKIPKLLPHRLFPFARYSIWLDSKLRLQLDPLLILEYFLWRKGYEFAISNHYDRHCVWEEVAQNKKLNKYNHTVIDQQFSFYRADGLERFDASDPNKLLPSNVPEGSFIIRAHTPMSNLFSCLWFNEIDRFTPRDQLSFAYTYQKLRRMNPDKPFHLNMFKDCERRHIAKLFRHRLDDKRIHH 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00805 698 MobiDBLite consensus disorder prediction 248 273 - -
Vian3g00805 698 PANTHER ALKALINE CERAMIDASE-RELATED 45 694 IPR006852 -
Vian3g00805 698 MobiDBLite consensus disorder prediction 117 184 - -
Vian3g00805 698 Coils Coil 187 207 - -
Vian3g00805 698 MobiDBLite consensus disorder prediction 297 315 - -
Vian3g00805 698 Pfam Protein of unknown function (DUF616) 370 689 IPR006852 -
Vian3g00805 698 MobiDBLite consensus disorder prediction 248 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00805 Vian-Chr3 8478155 8489859 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00805 - - gmx:100810524 1210.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00805 3 8478155 8489859 Vian3g00805 3 8478155 8489859 ECH