Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00803 ATGGGTGACAAGAGAAAGAAGCAGCGTCGTCTGCAGGACTCGTCGACCTCCTCATCCTCTTCGTCTTTGTCGGACTCCGACCACTCTTCGCGGCGGTGGCGACGGCGGCGCGAGAAGGAGAGGCGCAGAAAGAGCGGGGAGAAGGAGGAGCGAAGGAGAAAGAGGAGAGACAAAGAGAGGAAAAAGAGGAAGAGGCTCCATGATTCGGATGACTCTTCCAACTCTTCGGAGGATGAAGACGAGCAACCTAGGGTTCTGCCCGAAACTGTGATAACTGAAATGATGAGAGAGTTCCCTAACGTCGGCAACGATTTGAAGCAGCTTTTGCAAATGATTGATAACGGACAAGCTGTTGACATAAAGGGTATATCAGAACGATCTTTGGCGAAGCATTTGAAGAAGCTGTTTCTTTCGTTAAACCTCAAGGAGAATGGAGATAGGGTTTTCTTGCTATCTTCTAAAGGTCGCCCAACTTTGGATGTTCTTGGCCCACTCATTCACTCCTACACAAATCCCATAAATGAGCAAGCTGAAGCTTCTGCGCCGGTGGTGCCTGCATCCAATTCAGTTCCAGTGGATGCTGGAAATGAAAAGATGGTGGATGACCATGTGATCGCATCACCAGATGATCATTCTGTTGGTCCAAGGAAAAGGATGATTGGCCCTGCAATGCCATCAGCTGAATTACTGGCTGCCGCTGCCAAATTAACAGAGGCGCAGACTGAGCTCAGAGAGGCCGAATTGGATGATGATAGTGAACTATTTATTGGACCTCCACCACCAGCTATGGTTACTGAAGCAGAATCAGCTAATGAAGCAGAACGTTTTGAAGAGATAGCTTGGTTTCCTCTGATCAACGGAGTCTCTAGGGAAGCTCCAGTTGTTTATTCTGAGATTTTTTTGGGGGTGGTGATGGTGGTGACCAGAATAATGGAAGTTGAGGCTGATAGCCCATATGATGTTCTAGGAGTCAATCATAATATGTCCGATGCAAATGTAAAGAAAAGGTACTGGAAGATATCACTATTGGTTCATCCAGATAAATGCTCTCATCCGCAAGCCCACCAGGCTTTCATTAAGTTAAATAAAGCTTTCAAAGAGTTACAAGATCCAGAAAAGCGGAAAGCAATGGATGAGAAAATCAAGCTCAAGCAAGAACAAGAGGAATTGAAGGCTGAACTTAAAACCATGCGTGAAGCTGCATTGTGGAGAAGATCTCAAGGTATTTCCATGGAGGGTGATGAAGAACTGCTGGCACAGACAGAGGTTAAAGTGGAGCCTAAAAGGGATGAGTGGATGACAACACTGCCACCGGAAAGGAAACCTGGTGGTGTGACTATGCAATCAACCAAGTTTAGTAGGGGCCCAAAGGAAGGTAGAGGTGATACTAGTGTTTGGACAGACACCCCTTTGGATAGGGCCCAGAAAGCAAAGATGAATTATTTGGAGGCATACAATGAAGCTACTGCACTAGCTTCAAATGATGAGGATAAGAAAAGGGCCAGTGAGGATGCAGACTTGGTGGACAAATACAATAAAGCAAAACGGTCAAAAACATTGGTGCAGAAACATCAAGAAGAGGTGGCTAACAAATCCAAGAAAAAGTCTAAGCAAGTGAAGCAACAGCCAGGGAAGCAAGAGTGGATGGGTCAACATCCATGGAAGCCATGGGACCGTGAAAAGGATCTGACAGCTGGAAGGAAAAGTATAAATTTTGATTCAGAAAGCATGACTAAGGATTTATCTTCAAGGTTTTCTTCTGGAAACTTTCAGAGGAACTTCCTTTGA 1788 0.4553 MGDKRKKQRRLQDSSTSSSSSSLSDSDHSSRRWRRRREKERRRKSGEKEERRRKRRDKERKKRKRLHDSDDSSNSSEDEDEQPRVLPETVITEMMREFPNVGNDLKQLLQMIDNGQAVDIKGISERSLAKHLKKLFLSLNLKENGDRVFLLSSKGRPTLDVLGPLIHSYTNPINEQAEASAPVVPASNSVPVDAGNEKMVDDHVIASPDDHSVGPRKRMIGPAMPSAELLAAAAKLTEAQTELREAELDDDSELFIGPPPPAMVTEAESANEAERFEEIAWFPLINGVSREAPVVYSEIFLGVVMVVTRIMEVEADSPYDVLGVNHNMSDANVKKRYWKISLLVHPDKCSHPQAHQAFIKLNKAFKELQDPEKRKAMDEKIKLKQEQEELKAELKTMREAALWRRSQGISMEGDEELLAQTEVKVEPKRDEWMTTLPPERKPGGVTMQSTKFSRGPKEGRGDTSVWTDTPLDRAQKAKMNYLEAYNEATALASNDEDKKRASEDADLVDKYNKAKRSKTLVQKHQEEVANKSKKKSKQVKQQPGKQEWMGQHPWKPWDREKDLTAGRKSINFDSESMTKDLSSRFSSGNFQRNFL 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00803 595 Gene3D DnaJ domain 307 401 IPR036869 -
Vian3g00803 595 Coils Coil 471 491 - -
Vian3g00803 595 MobiDBLite consensus disorder prediction 552 568 - -
Vian3g00803 595 Coils Coil 373 400 - -
Vian3g00803 595 MobiDBLite consensus disorder prediction 433 467 - -
Vian3g00803 595 SUPERFAMILY Chaperone J-domain 317 375 IPR036869 -
Vian3g00803 595 MobiDBLite consensus disorder prediction 63 85 - -
Vian3g00803 595 Pfam DnaJ domain 318 378 IPR001623 -
Vian3g00803 595 MobiDBLite consensus disorder prediction 1 85 - -
Vian3g00803 595 MobiDBLite consensus disorder prediction 493 595 - -
Vian3g00803 595 Pfam Protein of unknown function (DUF3752) 437 586 IPR022226 -
Vian3g00803 595 SMART dnaj_3 316 373 IPR001623 -
Vian3g00803 595 ProSiteProfiles dnaJ domain profile. 317 381 IPR001623 -
Vian3g00803 595 MobiDBLite consensus disorder prediction 493 534 - -
Vian3g00803 595 CDD DnaJ 318 370 IPR001623 -
Vian3g00803 595 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 307 595 - -
Vian3g00803 595 MobiDBLite consensus disorder prediction 569 595 - -
Vian3g00803 595 Coils Coil 229 249 - -
Vian3g00803 595 PRINTS DnaJ domain signature 337 352 IPR001623 -
Vian3g00803 595 PRINTS DnaJ domain signature 319 337 IPR001623 -
Vian3g00803 595 PRINTS DnaJ domain signature 353 373 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00803 Vian-Chr3 8453723 8463355 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00803 - - gmx:100788598 816.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00803 3 8453723 8463355 Vian3g00803 3 8453723 8463355 ECH