Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00781 ATGGCAATGACGGCGAAGAGTAACAAGAGCAACACCTCCTTAACCGTTCCGAATCTGTTTCTCTTCTTCACCCTCCTCTCCCTTTTCTCACTTTTCATCTTCCTCTTCTTCCCCACCGCCACAATCCTACACTCTTCTACCTACCCTCACGCTTCTACCACCATCAACGTCTACGTCGCCGACCTCCCCCGATCCCTCAACTACGACCTTCTCCACCGTTACTGGACCTCGTTCTCCGACTCCCGACTCTCCACCGATGAAGATCACCGGCATCCCCCCTCCCTCCATCCAGTGGCCAAATACCCGCCTTACCCGGACAACCCTCTCATCAAACAGTACAGCGCGGAGTACTGGATCATGGGCGACCTTATGACCCCACCACAACATCGCGTCACATCCTTCGCCAAGCGTGTCCTCGACCCGCGTCTCGCCGACGTCGTTTTCGTTCCGTTCTTCGCCACGCTCAGCGCGGAGATGCAGCTCGGAGCGAACAAGGGCGCGTTCAGGAAGAAGACCGGGAACGAGGATTACAAGCGGCAGAGGGAGGTCATGGACGCCGTTAGAAGCACCGAGGCCTGGAACCGTTCCGGAGGACGAGATCACGTGTTTGTGCTGACGGACCCGGTGGCCATGTGGCATGTCAAAGATGAGATTGCCCCTGCTATTTTGCTCGTTGTGGATTTTGGCGGTTGGTATAGGCTTGACTCCAGAGGTTCTAACTCTATTGAGAGTGGTGTGGTTCCTCATACTCAAGTTTCTGTGATTAAAGATGTGATTGTGCCTTACACGCATTTGCTTCCGAGGTTGGATTTGTCACAAAACAAGGAGCGTCACCAACTTCTGTATTTCAAAGGAGCTAAACATAGGCACCGGGGAGGTATGATTAGAGAGAAGTTATGGGATCTAATGATTGGTGAGCCTGGTGTTATAATGGAAGAAGGTTTCCCTAATGCAACTGGGCGAGATCAATCAATAAAAGGGATGAGAACATCAGAATTTTGTCTGCATCCAGCTGGAGATACACCGACTTCATGCCGACTTTTTGATGCAATACAAAGTCTTTGTATACCTGTCATTGTCAGTGACAACATTGAGCTGCCATTTGAAGGTATGGTGGATTATTCGGAATTTTCTGTTTTTGTGGCAATTAGTGATGCCCTGAAACCAAACTGGCTCGTCAATCATCTTAAAAGCTTTTCAAAAGAGCAGAAAGCTACGTTCCGCCAAAATATGGCTCGGGTACAGCCCATTTTTGTCTACGATAATGGTCATCCGGGTGGTATTGGACCAGTGCCTTTGGATGGTGCAGTGAATCACATATGGAAGAAAGTTCACCAAAAATTGCCAATGATAAAAGAAACCATAATTCGAGAGAGAAGAAAGCCACCTGGTGTTTCAGTTCCACGACGTTGTCATTGTACCTGA 1425 0.4933 MAMTAKSNKSNTSLTVPNLFLFFTLLSLFSLFIFLFFPTATILHSSTYPHASTTINVYVADLPRSLNYDLLHRYWTSFSDSRLSTDEDHRHPPSLHPVAKYPPYPDNPLIKQYSAEYWIMGDLMTPPQHRVTSFAKRVLDPRLADVVFVPFFATLSAEMQLGANKGAFRKKTGNEDYKRQREVMDAVRSTEAWNRSGGRDHVFVLTDPVAMWHVKDEIAPAILLVVDFGGWYRLDSRGSNSIESGVVPHTQVSVIKDVIVPYTHLLPRLDLSQNKERHQLLYFKGAKHRHRGGMIREKLWDLMIGEPGVIMEEGFPNATGRDQSIKGMRTSEFCLHPAGDTPTSCRLFDAIQSLCIPVIVSDNIELPFEGMVDYSEFSVFVAISDALKPNWLVNHLKSFSKEQKATFRQNMARVQPIFVYDNGHPGGIGPVPLDGAVNHIWKKVHQKLPMIKETIIRERRKPPGVSVPRRCHCT 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00781 474 Pfam Exostosin family 54 395 IPR040911 -
Vian3g00781 474 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 52 441 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00781 Vian-Chr3 8203587 8206556 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00781 - - gmx:100790936 811.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00781 3 8203587 8206556 Vian3g00781 3 8203587 8206556 ECH