Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00780 ATGTGTATTATGTGCCATTATTGTGGTGCGGGCTTGTCAGAATCAAATTTTGACAATAAAAAAGAGGGTAATGAGAGTAGTCTAAAGTTCAATGCCAAAGTTTCCATTAGGCCTTGCAAATCCTGTGGAGAGAAGCTAGAGCGAGCAAATTCGAAGTGGCGTAGTAATAGTCCGTTTGTGACACCATATGTCAGTCCAACTACATCATTGCAAAGTACTGATAGCTGTGTCTCCACCTGCAGTGACTTTTCAGTTGATGTGAACTCATGTGACAGGAATAGTCAAGAAGAAAGTACAGTTGAAGGTGGTGTAGAAGATCTCGGTTATCAAGTGAATGGTTCACAAAAAGTAATGGAAAACTATTCCGAAGAAAGCAATAACAACAATGAGGGTTACACAGTGAGAGATGTGGAAATTGCACAAGGGCATAACCTTCAAGAAGAAAAAGCTTATCATTCTGAAGACCCTATTGAATCCTCTGTCGAGGAAACTGAATATTCTCTTCCAGATGATCTGGAAGTCCAAACTTGGGAACCTCCTGAGCCGGAGAACCCACAGGATGACATGGACAATAGTGTGACCTGTAATGACGATGATGAAGACCACGGCATGGGGATTGCAAACTTGGGTGAGCCAATTTCTATCAATAGTTCTGAGGATGAATTAAGTGGGACCTATAGGTTCAAAGAGGAAAAACTAAGAGCAATGGAAGAAATGATGAATGGCAAATTCAAGGCACTTGTTGGTCAGCTTCTTAAATCTGTAGGAGTTTCCCCTTCGGACGAAGGTGATAAGTGTTGGGTGGACATAGTTACATCTTTATCATGGGATGCCGCTTCTTTTTTGAAGCCTGATGCAGTAGGAGGTAGTACAATGAATCCTGATGGATATGTTAAAGTCAAGTGCATTGCTGCTGGTTCTCGTGGCCAAAGTCAACTAATCAGAGGTTTGGTCTTCAAAAAACATGCTGCTCACAAGCATATGCCAACTAAGTATAAAAATCCTAGATTATTACTGATTAGCGGCGCACTTGGTCATTCTATTGATGGCCTGTCCTCATTTGACTCCATGGACCAGGAGAAGGATGATCTGAAATCTAAAATGGATCGTATTGAAATGTGCCATCCAAATGTTATATTAGTGGAGAAAACTGTCTCTCGTGATATACAAGAGTCAATTTTGGCAAAGGGAATGACACTTGTGCTTGATATGAAGCTTCACCGTCTGGAAAGAGTTGCACGTTGTACTGGTTCACCAATTTTATCATGTGATAATTTGAATGGTCAAAAGCTAAGACACTGTGAGTTTATTTATTTTGAGAAGTTTGTGGAGGAACATGATGGGGTTGGTGAAGGAGGAAAGAAGCCCATCAAGACTTTGATGTTCATTGAGGGCTGTCCTACACGATTGGGCTGCACGATTTTACTGAAAGGAACTCACAGTGATGAACTGAAGAGGATTAAATGTGTCTTGCGCTGTGCAGTTGTCATGGCATATCACCTAATTCTTGAAACTTCATTTCTTGTTGATCAGAAAGCTATGTTTTCTACCGTTCCATCTTCGAGTGTCACAGATATCTTGCCAACCAATAAAGATTCCTGTGATTCAGCATCGACTAATTCAAGTATTCCATCTCTTGAGTATTCTGGTGAAAATGGAATAGTTAGTACTGATATTGTTATATGCAATGGACTTCAAGAAAAAAATACAAATGGAAACAACTTAGTAGAGGAGTTTTCTCCATTCTCTTGTGAACCATATAATCCTGCTGTCTTTTCTGGGTTCTCAGCTATTTCATCTTCTCTTAAGAAAGTTATGGGGGATAGTTTTCCCTTTGCTTCTTCTGCTCCTTATCAATCTTTATCAGCATACTTTGGCTTCAATGGAAGGAAGCCTGATGGTCAGGTTGATGAGTCAATTTCTGTTTTAAACTCTCCAGAGGCTGATGGAATTACCATGATGGAAGGAAAAAATCATTCTAATGAAGTGAAGTCACTTAATGATGGGCAATCCCTGACTTCCCCCGTGTACATAGATTCCAGTGGCAATATAAGTAAAGATGGCCATAATGATAGAAAAGAACTCCAAAGTAAAGATGATATCAATTCAGTATTGGATTCTCAGAGTATTTTGGTCTTGATGTCTAGCCGGAATGCCTTAAGAGGCACTGTATGCAAGCAAAGTCATTTTTCCCATATTATGTTCTACGACAATTTTGATATTCCACTTGGAAAGTTTCTTCAGGACAACTTGCTCAATCAGACAAGACTTTGTGATGCCTGTCAAGAATTGCCAGATGCTCACTTTTATTATTATGCTCATCACAATAAACAGCTCACAATACAAGTTAAACGGTTGCCCCTGGAAAAACGTTTGCCTGGGGAGGCAGAAGGGAAAATTTGGATGTGGAGCCGTTGTCGAAAATGCAGTTCTGGTTCTACAAAGAGAGTGTTGATATCTACCACTGCCCGTAGTCTATCATTTGGAAAATTTTTGGAACTTGGCCTTTCTCGCTATTCTTCTAGCAGAAAATTGAGTTGTGGCCATTCTCTTGATAGGGATTTTCTCTATTTCTTTGGATTAGGTCACATGGTTGCTATGTTCAGATATTCTTCTGTCACCACATACACTGTGTCTATGCCTCCTCAGAAACTGGAGTTCAATGGTGCAATGAGACAAGAGTGGCTTTTGAAAGAGACTAAGAATGTGTATATGAAAGGCATATCATTATTCAGAGAAGTTGCAAACTGTTTGAAGACAATACAATTTGATGGCCTTGGAGGATCAATTAGAGATTTCTCTGAGGTTGAGAAGATGTTAAAGCAAGAGCAAGAAGAGTTTGAGGAAAATGTCAAGACTGCCATTGCTAAAAAAGGGGATCCAGACCAGGCTTCCTTCAAACTTCTCACTTTGAACCGGTTAATGTGGGATCTTTTGATTCAATCCTATGTGTGGGCTCAACGGTTGTACCCATTACGCTCACTTGATAGCTTAAGACTTGAATCTGATGTCTCTGAGAAAGTTAGTCAAGATGGGGATATAGAAATTACGTTTGACACACCTGTTCAAGTAGATGAACTACCAATAAAGGAAATTCCAATTGGAGGACCTCTTCTGGACTGTAATGAACAAGATGATCCATCTAACACACAGGATGTGAAAGTACCTGTTGTTGATGATTTGATATCAAGGAGATCTTCTGACCAAAAGTTGAAATTGAGTCTGGATGTTTCCACTCAGTTACCAGATCATCTTGAAGTACGCAAGAATTCTCCAGTTTCTACAGATATTCCAGCTAATAATCCAGTTGCAGATTTGAAGCTATTAAGTAAAAGTGCTTCCAATTCACCAGTTTCCAACTTGCTGGATTCAAATGATTGGTTCTGGAAACCATTTACCGACATTCGGCAGATAGGCATAAGGGAATTCCAGAAAAGATTATTGCAAAAATTTGAATCTGTAAGCAGCTCCGTTGCTGAATATATACCCACGGCCAATCAATTAATCACCGATGAAGGTACACGGTTGCATATCCCTCTCAAGACTGACAATCATGTTGTGTCTGACTTCGAGGGTGAACCCTCAAGTATTATTGCTTGTGCACTGGCCTTATTGAAAGATACATATGAGGTATCAGAAATTGATGATGAGGACGATAGAAATGAAACTGGTATAACTTCAAATTCATCAGAAAGTTTGCATAGCTTGACTAATGGTACCTTAACTTCTTTACAATCATTTTCAAGGAGTTCTTCAGATTCTGAGTCTGTACATTCTGCAGCAAGCAGTTCAGAAGAGTCACGGGCCTCTCGTGCTACAGAAAACCATAGCATAGAGATTGCTATGGGTGGTGCAAAATCACTTGGCAGGGAAAAATATTCAGTGATATGTCATTATTTCAAGCAGTTTCGTGAACTTAGAAACTGGTGTTGCCCATCCGAGCTTGATTTTATTGCTTCATTAAGCCGCTGTAGGAATTGGGATGCCAAAGGTGGAAAAAGCAAGTCCTATTTTGCAAAAACACTTGATGACAGATTCATCATAAAGGAAATAAAGAAGACAGAACTTGATTCATTTTTGGGGTTTTCTTCTTTGTATTTCAAACACATGAGAGAGTCATTTGAGTCTGGAAGTCAAACTTGTCTTGCAAAAGTCTTGGGGATCTATCAGGTTACTAAAAGACATGTCAAAAGTGGAAAAGAGGTTAAATATGACCTCATGGTGATGGAAAATCTTACCTACAATCGAAATATTACTCGCCAGTATGATCTTAAAGGTGCTCTTTTTGCCCGGTACAATTCTGCTGCTGATGGTGATGGAGATGTTCTTTTGGATCAGAACTTTGTGAATGACATGAACTCTTCCCCATTATATGTCAGTCATAAAGCAAAGCGTGTTCTTCAACGCGCTGTTTGGAATGACACATCTTTTCTGAATTCAATCAATGTGATGGATTACTCCTTGCTTGTTGGAGTAGATTCTCAGAAGCGCGAGCTAGTCTGCGGGATCATTGATTATCTCAGGCAATATACATGGGACAAGCATCTTGAGACATGGATGAAGTCATCACTTGTTGTGCCAAGAAATGTGTTGCCAACTGTAATCTCTCCTAAAGAATACAAAAAGAGGTTCAGAAAGTTTATGTCTACATATTTTTTTAGTATTCCAGATCACTGGTGTTCTCAGAAATCTTCCAATCCTTGCAAACTTTGTTGCTCAGGGGAAGAAGATGATGATCATCCTTCCCCAGAAAAGCCCTAG 4761 0.3963 MCIMCHYCGAGLSESNFDNKKEGNESSLKFNAKVSIRPCKSCGEKLERANSKWRSNSPFVTPYVSPTTSLQSTDSCVSTCSDFSVDVNSCDRNSQEESTVEGGVEDLGYQVNGSQKVMENYSEESNNNNEGYTVRDVEIAQGHNLQEEKAYHSEDPIESSVEETEYSLPDDLEVQTWEPPEPENPQDDMDNSVTCNDDDEDHGMGIANLGEPISINSSEDELSGTYRFKEEKLRAMEEMMNGKFKALVGQLLKSVGVSPSDEGDKCWVDIVTSLSWDAASFLKPDAVGGSTMNPDGYVKVKCIAAGSRGQSQLIRGLVFKKHAAHKHMPTKYKNPRLLLISGALGHSIDGLSSFDSMDQEKDDLKSKMDRIEMCHPNVILVEKTVSRDIQESILAKGMTLVLDMKLHRLERVARCTGSPILSCDNLNGQKLRHCEFIYFEKFVEEHDGVGEGGKKPIKTLMFIEGCPTRLGCTILLKGTHSDELKRIKCVLRCAVVMAYHLILETSFLVDQKAMFSTVPSSSVTDILPTNKDSCDSASTNSSIPSLEYSGENGIVSTDIVICNGLQEKNTNGNNLVEEFSPFSCEPYNPAVFSGFSAISSSLKKVMGDSFPFASSAPYQSLSAYFGFNGRKPDGQVDESISVLNSPEADGITMMEGKNHSNEVKSLNDGQSLTSPVYIDSSGNISKDGHNDRKELQSKDDINSVLDSQSILVLMSSRNALRGTVCKQSHFSHIMFYDNFDIPLGKFLQDNLLNQTRLCDACQELPDAHFYYYAHHNKQLTIQVKRLPLEKRLPGEAEGKIWMWSRCRKCSSGSTKRVLISTTARSLSFGKFLELGLSRYSSSRKLSCGHSLDRDFLYFFGLGHMVAMFRYSSVTTYTVSMPPQKLEFNGAMRQEWLLKETKNVYMKGISLFREVANCLKTIQFDGLGGSIRDFSEVEKMLKQEQEEFEENVKTAIAKKGDPDQASFKLLTLNRLMWDLLIQSYVWAQRLYPLRSLDSLRLESDVSEKVSQDGDIEITFDTPVQVDELPIKEIPIGGPLLDCNEQDDPSNTQDVKVPVVDDLISRRSSDQKLKLSLDVSTQLPDHLEVRKNSPVSTDIPANNPVADLKLLSKSASNSPVSNLLDSNDWFWKPFTDIRQIGIREFQKRLLQKFESVSSSVAEYIPTANQLITDEGTRLHIPLKTDNHVVSDFEGEPSSIIACALALLKDTYEVSEIDDEDDRNETGITSNSSESLHSLTNGTLTSLQSFSRSSSDSESVHSAASSSEESRASRATENHSIEIAMGGAKSLGREKYSVICHYFKQFRELRNWCCPSELDFIASLSRCRNWDAKGGKSKSYFAKTLDDRFIIKEIKKTELDSFLGFSSLYFKHMRESFESGSQTCLAKVLGIYQVTKRHVKSGKEVKYDLMVMENLTYNRNITRQYDLKGALFARYNSAADGDGDVLLDQNFVNDMNSSPLYVSHKAKRVLQRAVWNDTSFLNSINVMDYSLLVGVDSQKRELVCGIIDYLRQYTWDKHLETWMKSSLVVPRNVLPTVISPKEYKKRFRKFMSTYFFSIPDHWCSQKSSNPCKLCCSGEEDDDHPSPEKP 1586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00780 1586 SUPERFAMILY GroEL apical domain-like 310 478 IPR027409 -
Vian3g00780 1586 CDD PIPKc_PIKfyve 1292 1552 IPR044769 GO:0000285
Vian3g00780 1586 Gene3D - 1412 1553 - -
Vian3g00780 1586 Pfam Phosphatidylinositol-4-phosphate 5-Kinase 1330 1496 IPR002498 GO:0016307|GO:0046488
Vian3g00780 1586 MobiDBLite consensus disorder prediction 1215 1234 - -
Vian3g00780 1586 SMART PIPK_2 1268 1553 IPR002498 GO:0016307|GO:0046488
Vian3g00780 1586 FunFam 1-phosphatidylinositol 3-phosphate 5-kinase isoform X1 309 478 - -
Vian3g00780 1586 FunFam 1-phosphatidylinositol 3-phosphate 5-kinase FAB1 1413 1553 - -
Vian3g00780 1586 Gene3D GroEL 309 478 IPR027409 -
Vian3g00780 1586 CDD Fab1_TCP 245 511 - -
Vian3g00780 1586 Pfam TCP-1/cpn60 chaperonin family 247 504 IPR002423 GO:0005524
Vian3g00780 1586 Gene3D Phosphatidylinositol Phosphate Kinase II Beta 1219 1411 IPR027484 -
Vian3g00780 1586 MobiDBLite consensus disorder prediction 1246 1268 - -
Vian3g00780 1586 FunFam Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D 1236 1411 - -
Vian3g00780 1586 SUPERFAMILY SAICAR synthase-like 1292 1553 - -
Vian3g00780 1586 ProSiteProfiles Phosphatidylinositol phosphate kinase (PIPK) domain profile. 1229 1552 IPR002498 GO:0016307|GO:0046488
Vian3g00780 1586 Coils Coil 937 957 - -
Vian3g00780 1586 PANTHER 1-PHOSPHATIDYLINOSITOL 3-PHOSPHATE 5-KINASE-RELATED 3 1565 - -
Vian3g00780 1586 MobiDBLite consensus disorder prediction 1246 1275 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00780 Vian-Chr3 8188984 8197839 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00780 328 1565 Acyl Lipid Metabolism Gene Families AT1G34260 47.829 0.0 1078
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00780 K00921 - gmx:100809696 2693.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00780 3 8188984 8197839 Vian3g00780 3 8188984 8197839 ECH