Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00708 ATGGGGGATCGAGGAGAGGACGAGGATTTGCAAATGGCGATTCGAATGAGCATGCAGCGCGCGACGCCGGAGACGAAGCGCAGCAAGCCGCAGGATGCCGCCGCCGGGGCGGTTTCGGAATCGTCGGAAGATTCGCCAGAGTCTAAGACCCGGCGGAGGGAGCTCATGGCGGCGGCGGCGGAGAAGCGGATAGCGGCAGCGGTGAGGGTTTTGCCATCATCATTGCCACCGGGGAAGAAAAGTGTTGAATTGGGGAGGAGAGAGGAGTTGCGTTTGAAGAGTGTGAATTTGAGTAAGGAACTTTCAGCGGAAGAAGCAAATCAGTTGTTTTCTATGGTGTTTGGGAATGAAGTCTCTAAGGGGATTCTTGCACAGTGGAGCAACCAGGGAATACGGTTTAGCTCTGATCCTGTAACATCAATGGGCCTAGTGCAGCATGAAGGTGGTCCCTGTGGCGTTTTGGCAGCTATACAAGCATTTGTGCTTAAACACATCATTTTCTTCAGTGATGAGTTGAAAGATGTACCATGCCTGCCACAGAAGGGTCTGGGTGCATCATTTAAAAGTCTGTCTGTTCCATCTTATAATTTTTCTTCACTCACTGAAGGTGTAAAAGTAAGGGCCCTCGTAAGAAGTATGGCTGAAATTTTATTTTCATGTGGAAGTAATAGAAGGGCTGTGATTGCAACTTTGAGCTTTCCAGAGAATGACATTCCGCGTTTTGAAGGGATTTCAGAGGATGAGGTTATTGCAAAATCACTTCAAGGTCTTTCTATTGAATCTGCCGTGGATCTGCAGAAAGTTCTTAGAGTCGAAACATGCGCATCACAAACAACTGCATTGCAACGGCTTGAAGCTAATCTTCCCTTCTTCCAAAGTCGAATGGGAGCATTGCTTTTCCTAATCTCTGCTTTACTTTCTCGAGGACTGGACTTGGTTCAAAGCGACAGGGATGATCCCAGCCTACCACTGGTTACAGCACCTTTTGGGCATGCCTCTCAGGAAATTGTGAACCTACTGCTCTGTGGGGAGGCTGTCCCTAATGTGTTTGATGGAAGGATGGATTTAGGGGGAGGGATGTTTCTGAAAGGTATATCTCGAGATGTGGAAGTTGGATTTCTCACACTTTTAGAATCCCTGAATTTTTGCAAGGTTGGTCAGCATCTGAAATCTCCAAAATGGCCTATATGGGTTGTGGGGAGTGAATCCCATTACACTGTGCTGTTTGCTCTAGACCCCAGCGTTCAAAGTGAGAATGAACTGGAAGGAAGGGAAACACAGATACGCAAAGCTTTTGATGCACAAGATCAGAGTGGAGGTGGTGGTTTCATTAGTGTGGAAGGTTTCCATCAAGTCCTCAGAGAAACAGATATCAAATTTCCACCAGAGAAGCTGGAACATCTTTGCTCCGCAGGGTTCATTGTGTGGAGTGAATTCTGGCAAGTAATTTTGGATCTAGACAAAAGTTTGGGAGGTTTGAAGGATTCATCAGGATTGATGGGTAAGAAGGTCTTTGATCTATACCATTTTAATGGGATTGCTAAATCAGATCTGAATGGCAGCCAAGTAAATTCTGCGGGTGAAACTCCACTACAAAGACCCCGGCTGACAAAATTGAGAGTTTCAGTGCCTCCAAGGTGGACGCCTGAGGAATTTATGGCAGATGTGAAGGTTTCATCTGCTCCTAGTGCTAGTGACTCTGCTGGGAAGGACAATGAAGTATCTAAACCGGAGCCTTCCCAGCATGCGCCTTTGGTGGACTGCATAAGGACACGCTGGGCCCGTGCTACCTGCAGCTGGTTTGGGGATCCTCCTAGTATAGTTTGA 1827 0.4729 MGDRGEDEDLQMAIRMSMQRATPETKRSKPQDAAAGAVSESSEDSPESKTRRRELMAAAAEKRIAAAVRVLPSSLPPGKKSVELGRREELRLKSVNLSKELSAEEANQLFSMVFGNEVSKGILAQWSNQGIRFSSDPVTSMGLVQHEGGPCGVLAAIQAFVLKHIIFFSDELKDVPCLPQKGLGASFKSLSVPSYNFSSLTEGVKVRALVRSMAEILFSCGSNRRAVIATLSFPENDIPRFEGISEDEVIAKSLQGLSIESAVDLQKVLRVETCASQTTALQRLEANLPFFQSRMGALLFLISALLSRGLDLVQSDRDDPSLPLVTAPFGHASQEIVNLLLCGEAVPNVFDGRMDLGGGMFLKGISRDVEVGFLTLLESLNFCKVGQHLKSPKWPIWVVGSESHYTVLFALDPSVQSENELEGRETQIRKAFDAQDQSGGGGFISVEGFHQVLRETDIKFPPEKLEHLCSAGFIVWSEFWQVILDLDKSLGGLKDSSGLMGKKVFDLYHFNGIAKSDLNGSQVNSAGETPLQRPRLTKLRVSVPPRWTPEEFMADVKVSSAPSASDSAGKDNEVSKPEPSQHAPLVDCIRTRWARATCSWFGDPPSIV 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00708 608 Coils Coil 87 107 - -
Vian3g00708 608 SMART DUF4205_3 110 478 IPR025257 -
Vian3g00708 608 MobiDBLite consensus disorder prediction 1 52 - -
Vian3g00708 608 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 5 24 IPR003903 -
Vian3g00708 608 MobiDBLite consensus disorder prediction 557 582 - -
Vian3g00708 608 Pfam Deubiquitinating enzyme MINDY-3/4, conserved domain 112 422 IPR025257 -
Vian3g00708 608 SUPERFAMILY EF-hand 424 484 IPR011992 -
Vian3g00708 608 SMART uim 5 24 IPR003903 -
Vian3g00708 608 PANTHER UNCHARACTERIZED 29 606 IPR039785 GO:0004843|GO:0071108|GO:1990380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00708 K22647 - gmx:100813222 1069.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00708 3 7370409 7379466 Vian3g00708 3 7370409 7379466 ECH