Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00681 ATGTCTCTCTTTATTTTCCCTGAAGAAGCAAACTCTTGCTTCCTCACCACGTTTTTTCTACGTTTGTGTAGGCCTAGCATGGAAAACAACCTTTGCCGTGTTGGCTTGCCTAAAGTTCCATCACTAGTTCAACATATATCAAACGTGAAAAACAGCTCCTCTTCCAAAGAAAGTGAAAGAAAAGGCCAAGGTGATGAACAGGAACATTCAGTATCTATCAACATGCCATCAAATTGTGAAGAGGTTCAGCTACATGACACCGTGAGAGTTCCCTACAGTGGTGAAACTGATCTTAATGGGGCTCCCATTTTCTCTTCTGAATCAACTACTACATACTCCAAGCCACGAATGCCATCACAATCAATGCCAAATGGCAGCGTGCAACCAGAGGCAGCAAGCAAAAGGTTGAACGATAACAGAACTAAGTTTTTCCAAACATGGTACGGTAAACTTGAGGCGAAATTATCAATTCTGCATGGAAAGGTACATACACAAAGTGTAGAAGACGATAACAACTTAAGCAACACTGAGAACCCTTTACCTGTTGATTCGTTCGTGAAAGCACTGGAAGATCCACATGTACAAACTCCTAAGAAGTCTTCAGAAGAGATGGTGCCTCCTCAGGACAAGCAGTGGCCATTCCTTCTTCGGTTTCCGATTTCATCTTTTGGTATTTGTCTAGGAGTTAGCAGTCAAGCAATTCTATGGAAAGCATTGGCCACGTCACCTTCCACTGAATTTCTTCACATAACTCCGAAAATAAATTTCGTGCTATGGCTTACCTCTGTTGCTGTTGTTGCTACTATTTTCGCCATCTATCTGTTCAAAATAATTCTCTATTTTGAAGCAGTTCGCCGCGAGTACCATCATGCAGTTCGTGTTAACTTCTTCTTTGCCCCATGGATATCCCTCTTGTTCTTAGCTCTTGGAGTTCCTTCATCGTTTGCAAAAGAATTGCATCATGCGGTTTGGTACATTCTAATGATTCCATTGTTCTTCCTTATGTTAAAAATATATGGACAGTGGATGTTTGGGGGCCAAAGGAAGCTCTCAAAGGTTGCCAATCCAACAAATATGCTAGCACTTGTTGGAAATTTTGTGGGAGCCTTATTGGGTGCATCTATGGGCCTAAGAGAAGGACCTATTTTTTTCTTGACTCTTGGACTTGCACATTATATGGTGATATTTGTAACTCTCTCACAGATGCTACCAACAAATAAGACCATCCCCAGGGACCTCCATCCAGTGTTCTTTCTTTTGGTTGCACCACCTAGTGTTGCTTCTTTGGCATTGGCCAAGATTCAGGGTTCTTTTCATTTGGAATCACGGATTTTCTATTTCACTTCCATGTTCCTATATCTCACGCTGGCTGTTCGGGTCAATCTTTTCAGAGGACTCAAATTCTCAATCTCATGGTGGGCCTACACTTTTCCAATGACTGCTGCTGCAATTGCTACCATAAACTACACAAATCAAGTCACAAACGTTGTAACTCAAACTCTGAGTGTAATATTGAGTCTCGTTTCTACATTCGTAGTAGCAACAGTGCTTGTCTCGACTATTGTGCATGCCTTTGTCCTCCGAGACCTCTTTCCCGATGACCTTGCCATTGCCACAAGTGAGAGAAAGCAAAAAACTCATAAGAAACGCTTCCCTTTAGGATTTGGAAGCCACGGACATGCCAAAAAGACTGAAAATTACTTGAAGTTTGTGAACTCGGATAAAAATGATTTAGTTTAG 1740 0.4167 MSLFIFPEEANSCFLTTFFLRLCRPSMENNLCRVGLPKVPSLVQHISNVKNSSSSKESERKGQGDEQEHSVSINMPSNCEEVQLHDTVRVPYSGETDLNGAPIFSSESTTTYSKPRMPSQSMPNGSVQPEAASKRLNDNRTKFFQTWYGKLEAKLSILHGKVHTQSVEDDNNLSNTENPLPVDSFVKALEDPHVQTPKKSSEEMVPPQDKQWPFLLRFPISSFGICLGVSSQAILWKALATSPSTEFLHITPKINFVLWLTSVAVVATIFAIYLFKIILYFEAVRREYHHAVRVNFFFAPWISLLFLALGVPSSFAKELHHAVWYILMIPLFFLMLKIYGQWMFGGQRKLSKVANPTNMLALVGNFVGALLGASMGLREGPIFFLTLGLAHYMVIFVTLSQMLPTNKTIPRDLHPVFFLLVAPPSVASLALAKIQGSFHLESRIFYFTSMFLYLTLAVRVNLFRGLKFSISWWAYTFPMTAAAIATINYTNQVTNVVTQTLSVILSLVSTFVVATVLVSTIVHAFVLRDLFPDDLAIATSERKQKTHKKRFPLGFGSHGHAKKTENYLKFVNSDKNDLV 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00681 579 MobiDBLite consensus disorder prediction 47 78 - -
Vian3g00681 579 MobiDBLite consensus disorder prediction 95 132 - -
Vian3g00681 579 CDD TDT_SLAC1_like 217 520 - -
Vian3g00681 579 Pfam Voltage-dependent anion channel 218 521 IPR004695 GO:0016020|GO:0055085
Vian3g00681 579 Gene3D - 214 531 IPR038665 -
Vian3g00681 579 MobiDBLite consensus disorder prediction 99 132 - -
Vian3g00681 579 PANTHER S-TYPE ANION CHANNEL SLAH3 134 545 IPR030183 GO:0006873|GO:0008308|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00681 Vian-Chr3 6931109 6933547 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00681 K26672 - vra:106771185 998.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00681 3 6931109 6933547 Vian3g00681 3 6931109 6933547 ECH