Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00678 ATGACAAGCCCTTCAGAGAGATACCAAAAACTTGGCTTAAGAGAGTCTCTACAAAAGTGTTACAGATACTCAATTGCCTGCAAAGAGCTAAGCTTTATCCTCAGAGAAGCCTTTCATCAAATTCCCAAAAGTTTGCAATCCATAATCTTCGAAGACACCCTCTTCGCTTTTCGTCTCCTCCCAGAAATAGAGACTAAGAGTGCTGTTTCAGCAGTCCACTTCCTCCTTCAGAGTGTAGAAGCAGCACTACCAAATCGAAAAAAGAATGTGGCTGTAACAGAATTTAAGCATGCTATGGTTTCTCATAAGAGACGCAGCAAAGCTCAACTGATAGAGAAAGCTTCACTGCAACTTCCACAAGATATTCTTGTACACGTTTTCAGTTTTCTTGATATGAAATCTTTGGTTTCAGCGGGGCTAGTCTGCTGGTCATGGAACATAGCTGCAAACGATAACCATCTGTGGCAGATGCAGCATGTTGTACTGTTCGGTAATGATGCTAAACTGAAGCATACGAAACCGGTTGAGGGAAAGAACTATAGTCTTTTGCAGGGAACCGTTGATAATAGACTTATTACTAACTGGAAAGACAGAGTTAAAGGAGCATACACTGGAGCATTATCTAGTATATTAACAACCAACCGGGGATATTGTGGACACTGCAAATCAGTAGTTTGGCTAAATAACGCAAAATGTCCCAATGTACACTCTGGAATATCTGAAATTCAAGATATCAAGCCCGTAACAGCATTCCAGGTTGTGGAATATCTTTTAGATGATTCTCTATCCATAACATCTTCCTCAGACAGTGACAGTGATTATGAAGGAGGGCCAGTTTCCAAGTTATGGGCATATGGGAAGTTCAGGAAATAA 873 0.4078 MTSPSERYQKLGLRESLQKCYRYSIACKELSFILREAFHQIPKSLQSIIFEDTLFAFRLLPEIETKSAVSAVHFLLQSVEAALPNRKKNVAVTEFKHAMVSHKRRSKAQLIEKASLQLPQDILVHVFSFLDMKSLVSAGLVCWSWNIAANDNHLWQMQHVVLFGNDAKLKHTKPVEGKNYSLLQGTVDNRLITNWKDRVKGAYTGALSSILTTNRGYCGHCKSVVWLNNAKCPNVHSGISEIQDIKPVTAFQVVEYLLDDSLSITSSSDSDSDYEGGPVSKLWAYGKFRK 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00678 290 SMART fbox_2 118 158 IPR001810 GO:0005515
Vian3g00678 290 Gene3D - 93 156 - -
Vian3g00678 290 SUPERFAMILY F-box domain 117 171 IPR036047 GO:0005515
Vian3g00678 290 PANTHER OS05G0526300 PROTEIN 1 286 - -
Vian3g00678 290 Pfam F-box-like 117 156 IPR001810 GO:0005515
Vian3g00678 290 ProSiteProfiles F-box domain profile. 112 158 IPR001810 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00678 - - gmx:100789652 441.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00678 3 6860027 6862937 Vian3g00678 3 6860027 6862937 ECH