Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00671 ATGGCTGCCACCAACAAAGACGAAACCAGCATCCCCAATGCATCTTCTTCTCCGATCTTCATATCCGCAGATAGCTTATGCAGTATCCTCACCCACCAAACTCTGATAAACCATTTCCGATCAACACTCCCTCAAGCCTCAGCCATTCTCCAAACCACAATTCGCCAACACTACCCTCTCTCTTCTTCTTCCTCCCTTCTCCTCATGCCCTGTTGGTCCTCTTCCCCGTCTCTCCCTTACGTCGGCGTCAAACTTGTCACCCATTTTCCGCAAAACTCCGCTCTCAATTTACCCGGCGTGCAGGGAAGCTATGTCCTTTTCAGTTCCACCACTGGCCAAACACTAGCTTCCATGGATTCCACCGAACTCACCCTTTACCGAACCTCATGCGTGTCTGGCTTGGCTTCCAAATACCTAGCCAGACAGGACAGCGAGGTTCTGGTTATGGTTGGCGCGGGTGCCCTGGCACCGCACTTGATTAAAGCCCATCTTTCCGCCGTACCCAGTTTGAGAAAAGTCTTCATCTGGAACAGAACTGTGGAAAAGGCAACCACTTTGGCCGACAAACTTAAGGAAAATGAGGAGTTTGCTGGGGTGAGTTTTGAGGGTTGTGGGTGTTTGGACGAGGTTGTCGGATTGGGGGACATTGTGAGTTGTGCGACGAATTCCGAGAAACCCCTTGTGAAGGGGGAGAGGTTGAAGGCTGGGGCTCATTTGGATTTGGTGGGTTCCTTCAAGCCTTCGATGATGGAGTGTGATGACGAAGCCATAAGGAGGGGAAGGGTGTTCGTTGACAATGAGGCCGCGATAGTTGAAGCAGGGGAGCTGGTGGGGGCTTTTGAGAGAGGGGTCATCAAGAAAGATGAGGTTGGAGGGTGTTTGGTGGAGCTTGTGAGAGGTGACAAGATTGGGAGAACCAGTTCTGACCACATAACTGTGTTCAAGTCTGTTGGATCTGCTGTTGTAGATATGATCGCTGCACAGTTGGTGTATGAGACTTACATAAGGAGCTAG 1014 0.5089 MAATNKDETSIPNASSSPIFISADSLCSILTHQTLINHFRSTLPQASAILQTTIRQHYPLSSSSSLLLMPCWSSSPSLPYVGVKLVTHFPQNSALNLPGVQGSYVLFSSTTGQTLASMDSTELTLYRTSCVSGLASKYLARQDSEVLVMVGAGALAPHLIKAHLSAVPSLRKVFIWNRTVEKATTLADKLKENEEFAGVSFEGCGCLDEVVGLGDIVSCATNSEKPLVKGERLKAGAHLDLVGSFKPSMMECDDEAIRRGRVFVDNEAAIVEAGELVGAFERGVIKKDEVGGCLVELVRGDKIGRTSSDHITVFKSVGSAVVDMIAAQLVYETYIRS 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00671 337 Pfam Ornithine cyclodeaminase/mu-crystallin family 57 334 IPR003462 -
Vian3g00671 337 PIRSF CryM 12 337 IPR003462 -
Vian3g00671 337 PANTHER KETIMINE REDUCTASE MU-CRYSTALLIN 19 335 IPR003462 -
Vian3g00671 337 Gene3D - 141 318 - -
Vian3g00671 337 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 18 335 IPR036291 -
Vian3g00671 337 Gene3D ornithine cyclodeaminase, domain 1 50 331 IPR023401 -
Vian3g00671 337 FunFam Ornithine cyclodeaminase 141 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00671 Vian-Chr3 6792952 6793965 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00671 - - gmx:100804363 545.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00671 3 6792952 6793965 Vian3g00671 3 6792952 6793965 ECH