Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00669 ATGCTCCTCAAGCCTATCTTCATTTCACAACTTCCTTTTCAAACTGAAAAATCAACTCTTCCTCATTCACATAGTTTTTCAACTCCGTTTTCTCTTTCCCGTTTTTCACCAACATTTCTGCTTTCATCTCAGCTCTCACAAACTTCAACAACTATGAAGAAAGTTGTGTTGAAGGTGGATGTAAATGAAGACAAAATCAAGCAAAAGGCTATGAAAGCTGTCTCCGGCATTTCAGGTGTGGAGTCAGTTTCTGTGGACATGAAAGAGAAGAAATTGACCTTAATCGGGGACATTGATCCAGTACAAGTAGTTGCCAAGCTAAGGAAGTTCTGTCACGCTGACATAGTTTCTGTTGGACCTGCAAAAGAGGAAAAGAAAGAAGAACCTAAAAAGGATGATAAAAAGAAGGAAGAAAAGAAAGATTCTACAAAAGAAATTGTTCTAGACCCACTCAAATTCCATCAAACGTATGGTTACTATTATCAGATGAAACCACAATACAATCCGTATTACAGCGCCATAAGTGCGGAAGAGGATCCTAATGGCTGTGTCATTGTCTAA 561 0.385 MLLKPIFISQLPFQTEKSTLPHSHSFSTPFSLSRFSPTFLLSSQLSQTSTTMKKVVLKVDVNEDKIKQKAMKAVSGISGVESVSVDMKEKKLTLIGDIDPVQVVAKLRKFCHADIVSVGPAKEEKKEEPKKDDKKKEEKKDSTKEIVLDPLKFHQTYGYYYQMKPQYNPYYSAISAEEDPNGCVIV 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00669 186 ProSiteProfiles Heavy-metal-associated domain profile. 52 119 IPR006121 GO:0046872
Vian3g00669 186 MobiDBLite consensus disorder prediction 121 143 - -
Vian3g00669 186 SUPERFAMILY HMA, heavy metal-associated domain 51 110 IPR036163 GO:0046872
Vian3g00669 186 Gene3D - 48 124 - -
Vian3g00669 186 CDD HMA 72 109 IPR006121 GO:0046872
Vian3g00669 186 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 53 183 - -
Vian3g00669 186 Pfam Heavy-metal-associated domain 64 109 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00669 Vian-Chr3 6775748 6776666 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00669 - - vum:124842115 204.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00669 3 6775748 6776666 Vian3g00669 3 6775748 6776666 ECH
Vian8g01007 8 26667984 26673474 Vian3g00669 3 6775748 6776666 PCT