Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00661 ATGAATTCAGAGTCAGAAGTAAATGAAGGTATTTCTGGAAAGATGAAGAAGCATTTGCAAGTGGGGATATGGTGCTTCTCATTGTTCATCTTTGTTGGGTATGTATTGGTTTGGATTGTGAGACCTACCAACATCTTCTATCTACAATGGTTTCCAGACATTCAAGCAAAGGCAGATTCTGTATACTTCGGAGAACAAGGGACAACCATACTCATTTACACATTTCCAATCTTACTAATTGCCACTTTAGCGGGTTTATACCTTCATTTGGAGCAAAAACCTTCGAATCACAATACTGAAAGGAAGGGGAGATTCCTAGGATTGGCATCATGGAAAAGACCATTGCTTACAAAAGGTCCTCTTGGGATAATCACCATGACAGAGCTCTCTTTCGCCATCATGTTTGTTTTACTCTTGATTTGGACCTTTTGCTCCTATTTGCATAGCATGTTTGCAAGCGCTGCACAAGATGCAGCTAAGGAGAGAGACCAAGTGTGGGAAGTCAAGCTCGAATATTCAGCCATTGCTTTAGGCCTTGTTGGGAATATTTGCTTGGCTTTATTGTTCTTTCCAGTCTCAAGAGGGTCTTCAATTTTGAGGTTCCTTGGCCTAACTTCAGAGGGAAGCATCAAGTATCATATATGGCTCGGACACACTGCAATGGTCCTCTTCACAGCCCATGGTCTTGGTTATATCATTTTTTGGTATAAGACACACCAAATCTTAGAGATATTCAAATGGAACAAAGTTGGAGTGTCAAATGTGGCTGGAGAAATTTCTCTACTTGCTGGATTAATCATGTGGGCTGCTACCTTACCTTCCATAAGGCGAAAAGCTTTTGAGCTTTTCTTCTACACTCACTACCTCTACATTGTCTTTGTAATCTTCTATGTGCTACATTTGGGATTTTCCTCCTCTTGCGTGGTGCTTCCAGGATTTTACCTATTCATGATCGACCGCTACTTGAGATTCCTACAGTCTCAGCAAAAAATTCGGTTGGTTTCTGCCAGAGTTTTGCCTTGTGAAGCTGTTGAATTAAATTTCTCCAAGAACCTAGGACTGAGATATGCCCCCACAAGCACCATTTTCATTAATGTTCCTAGTATTTCCAAGTTGCAGTGGCACCCTTTTACAGTCACCTCCTGCAGTGATACTGATCCTGACACCTTAAGCGTTGTCATAAAAAATTCAGGAACCTGGTCCAATTCTTTGTACCAGAAGCTATCATCTTCATCTCCATTATCCCACCTTGATGTCTCCATCGAAGGACCCTATGGACCGGGTTCAACCTTTTACTCAAGGCATGAATTGCTTGTGTTGATAAGTGGAGGAAGTGGCATTACTCCTTTCATTTCCATAATCCGATCACTGGTCTTTAAGGCCAACACTGAAGGTGGCAAAACTCCAAGAGTTCTTCTTCTGTGTGCCTTCAAGAAGTGTATTGATCTCTCCATGATAGACCTCATCCTCCCAGTTTCCGCCACCAGCACCACCTTCGATATCTCACGCTTGCAGCTCCATATTGAAGCCTATGTAACCAGAGAGAAACAGCCAGACATGAATGACAAAAGGCTTACTCAAACATCATGGTTCAAGGCAAATCTATTAGATGAACCAGTTTCTCAAGTTTTAGGAAAAAACAGTTGGCTCTACCTTAGCATTATCATCTCATCCTCCTTTATATTATTCCTTCTAATTATTGGCATCCTAACTAGATACTACATATATCCAATTGACCATAATACGGACCTGATATACCCTAATTTGTCAAGGTCAAGTCTAAGCATGTTATTCATATGCATATCTATCGCCATTGTAGCAACATCTGCTTTCCTGTGGAACAAAAAACAGAACAAGGATTTGGGGCAGATTAAAAACATTTACTCATCAGATCAATCAACTTCTCCGGGTTCAGGATACTACAATGCTGACAAAGAATTAGGCAGCCTTCCCCTCCAATCCCTTGTCCAAACAGCTAACGTACACTATGGAGAAACACCAGACATAAAAAAAATACTCTCCGGCTGTGATGGATCAAGCATTGGAGTTCTTGTTAGTGGCCCAAGAAAAATGAGACATGAAGTAGCATCAATTTGCACTTCTTGTTCGACAGATGACCTACATTTTGAGTCAGTTAGCTTCAGCTGTTTTGCTTTGCATACTGTGTCAGTCTCCTATGTTCTCATTCTCCAATTACACAAGCTCTTCAACCAATCCGCGCGTGATCCGGTGGTGGCAGAGTAG 2244 0.4149 MNSESEVNEGISGKMKKHLQVGIWCFSLFIFVGYVLVWIVRPTNIFYLQWFPDIQAKADSVYFGEQGTTILIYTFPILLIATLAGLYLHLEQKPSNHNTERKGRFLGLASWKRPLLTKGPLGIITMTELSFAIMFVLLLIWTFCSYLHSMFASAAQDAAKERDQVWEVKLEYSAIALGLVGNICLALLFFPVSRGSSILRFLGLTSEGSIKYHIWLGHTAMVLFTAHGLGYIIFWYKTHQILEIFKWNKVGVSNVAGEISLLAGLIMWAATLPSIRRKAFELFFYTHYLYIVFVIFYVLHLGFSSSCVVLPGFYLFMIDRYLRFLQSQQKIRLVSARVLPCEAVELNFSKNLGLRYAPTSTIFINVPSISKLQWHPFTVTSCSDTDPDTLSVVIKNSGTWSNSLYQKLSSSSPLSHLDVSIEGPYGPGSTFYSRHELLVLISGGSGITPFISIIRSLVFKANTEGGKTPRVLLLCAFKKCIDLSMIDLILPVSATSTTFDISRLQLHIEAYVTREKQPDMNDKRLTQTSWFKANLLDEPVSQVLGKNSWLYLSIIISSSFILFLLIIGILTRYYIYPIDHNTDLIYPNLSRSSLSMLFICISIAIVATSAFLWNKKQNKDLGQIKNIYSSDQSTSPGSGYYNADKELGSLPLQSLVQTANVHYGETPDIKKILSGCDGSSIGVLVSGPRKMRHEVASICTSCSTDDLHFESVSFSCFALHTVSVSYVLILQLHKLFNQSARDPVVAE 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00661 747 Pfam FAD-binding domain 330 427 IPR013112 GO:0016491
Vian3g00661 747 SFLD Ferric reductase subgroup (FRE) 21 714 - -
Vian3g00661 747 PANTHER NADPH OXIDASE 46 714 - -
Vian3g00661 747 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 326 431 IPR017927 GO:0016491
Vian3g00661 747 CDD NOX_Duox_like_FAD_NADP 333 514 - -
Vian3g00661 747 Pfam Ferric reductase NAD binding domain 435 699 IPR013121 GO:0016491
Vian3g00661 747 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 419 492 IPR039261 -
Vian3g00661 747 FunFam Ferric reduction oxidase 3 424 543 - -
Vian3g00661 747 PRINTS Cytochrome B-245 heavy chain signature 440 457 IPR000778 GO:0016020|GO:0016491
Vian3g00661 747 PRINTS Cytochrome B-245 heavy chain signature 231 251 IPR000778 GO:0016020|GO:0016491
Vian3g00661 747 PRINTS Cytochrome B-245 heavy chain signature 417 430 IPR000778 GO:0016020|GO:0016491
Vian3g00661 747 SUPERFAMILY Riboflavin synthase domain-like 330 426 IPR017938 -
Vian3g00661 747 Pfam Ferric reductase like transmembrane component 177 297 IPR013130 -
Vian3g00661 747 Gene3D - 419 546 IPR039261 -
Vian3g00661 747 SFLD Ferric Reductase Domain 61 715 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00661 Vian-Chr3 6710873 6715786 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00661 28 715 Miscellaneous Gene Families AT1G01580 51.009 0.0 728
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00661 K00521 - gmx:100779692 1193.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00661 3 6710873 6715786 Vian3g00661 3 6710873 6715786 ECH