Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00657 ATGGATTCGAGCGACAGTGGTCGTGGTTACTCCAAGCGCGAGAGGGATGACGAGGATTGGGAGTTCAGCGACAAGAGGAAGGATAGGTCTAGAAAGTTTGGTGGCAATGGGGACGAGGGCGAGGGTTCTGACGGAGGCGCCAGGAGAAAGCGCTCTAGCAGGACTGATAACGACGATTACGATTCGCGCTCCAAGCAAGGGGCCAAGAAGAGGCCGGAGGAGAGCACGTTGGAGAAGTTGAGTAGTTGGTATGAGGACGGGGAATTGGACGACAAGGCCGCGAGGAAGCGTGCCGGGGACGGCGATTTTCACGAGAGTATGGTGAGTAAGGAGGATGGTGGCGGTGGTGGCCGGGAGAAGGTTGGGCATGAGGCCCGGAGTTCGAGGAGGAAATGGGACGAGGTTGATGCTAATAGTGCGAGGAGGTCGCAGGATGAGAAAGGGGAATTCAGGAGTGGGAAACGCGATAGTTCTAGGGATAGGGAGAGGAGTGGATCTGCTAGGAGTGAGCATGGGGAGGGTAAAGCCTCTGGTGCTGATAGGGTTGTGAAGTCTAGCGGTAAGGAGGAGAGAAGGGGTGATTCCGAGAGGGGGAAGAGTAAGGGGAAGTCGGATTCGGTGGATGCTGGGCGTGAGGAGAGGGTTGAGAAGCCCAGGCATCATAGGGCCCCTGCTGGTTATGATGGGGCTGAAACCTGGGATAGGTCGTTGAATGTGGAGGAGGATGGGCATGTGCGGGTTAGGGATAAGAGTGCTAGGGAAAGTGGGAACTCAAACAGGTCGAGGACACCTGAGAAGAGTGGAAAACGCCACCAAGATTTGGAAAACTCGGATGTGGATTTTGAAAGAAGTGGTAGCTTTAAAAGAAAGGAGCATGAGGGCGATGGCTTTAAGGATGATAGATCCAAAGGGAAAGATGATACATGGAATGACAGGAGGAAGGATCGGGAAAGTTCAAAAGAAAGTTGGAAGAGGAGGCAACCGAGTAGCGCTGACAAAGAGAAAAACGAGGAGGGTGCTTTTGATGACAACAGAGATTGGGAGTTACCTAGACATGGTTATGAGAGGATGGACAATGAAAGGCCTCATGGACGGTTTGGTGGTAGAAAAGATGTGAGTAGGGGGGAAGCTGTTAAAACATCCACAAAGTTTGGGATTTCGAATGACAATTATGATGTGATAGAGATCCAGACCAAGTTTTATGACTATGGGAAATCAGAATCTATGTCCAACCATACTAAGAGAAATGAAGCTCATCAGCAGTTCAGTGCAAAATCTGGTGTTAATGATGAAGACTGGGCATATCATCAAGATGAAAGAGGAAGGAAGAATGATTTATCTGGTGATGATCTGAAGGAGAGATATACAGATGATGACTATGATTTTTATGGGGGAAGAGGAAGAGGTCAGAAAGGTGGTGTATCTGCCCGCACCACTGGCGGCCAAAGTTCTAGTAGTGGTGGCTCACAGCCTCAATATGGAAATCCGGAGTCTGGTTCCTTTAACAGAGCTGGTCCACAAGGAATGAAAGGTAACAGGGTTGGTAGAGGAGGAAGGATTAGGCCTACTGGGAGAGACAATCAGCAGGTTGGAATGCCATTGCCAATGATGGGATCACCCTATGGACCTCTTGCAATGCCTCCACCTGGACCAATGCAGCCTCTTTCACATGGTATATCACCTGCTCCCGGTCCACCAATGTCCCCTGGAGTCTTCCTTTCACCATTTACTCCTGCTGTTTGGCCTGGAGCTCGAGGTGTTGATATGAATATTATAGGTGTACCACCTGTGTCTCCTGTTCCCCCAGGTCCTTCAGGTCCAAGATTCAATGCTGCTAATTTGGGGAACCCACCAAATCCGGCAATGTATTATAACCAATCAGGTCCTGGAAGGGGAATACCCCCAAACATCAATACTTCTGGTTTTAATCCCCCAGGATCAATGGGTCGAGGAGCCCCACCTGATAAAACTCCAGGGGGATGGGCTCCTCCTAAAAGTAGTGGAGCTCTTGGTAAAGCTCCTTCCAGAGGTGAACAGAATGATTATTCTCAAAACTTTGTTGACACTGGTATGCGGCCACAGAATTTCATTAGGGAGCTTGAGCTCACAAATGTTGTGGAGGACTATCCTAAGCTTAGAGAGCTTATACAGAAAAAGGATGAGATTGTTGCAAAATCTGCATCTGCTCCTATGTATTATAAGAGTGATTTGAAAGAGTTTGAACTATCTCATGAGTTCTTTGGTACAAAGTTTGATGTCATTCTTGTGGATCCCCCATGGGAGGAGTATGTGCACCGTGCCCCTGGTGTCGCTGATCATATGGAGTATTGGACATTTGAAGAAATAATGAATCTCAAGATCGAGGCTATAGCAGATACGCCTTCTTTCATTTTCCTTTGGGTGGGTGACGGTGTAGGTCTTGAACAAGGTCGTCAATGTCTAAAGAAGTGGGGATTTCGTAGGTGTGAAGATATATGTTGGGTAAAGACAAACAAAAGTAATGCAACTCCAGGATTACGGCATGACGCACATACTTTATTTCAACATTCAAAGGAACACTGCTTGATGGGCATAAAAGGAACTGTTCGTAGAAGCACTGATGGCCATATAATTCATGCCAATATTGACACGGATGTCATTATAGCTGAAGAACCTCCGTATGGTTCAACACAAAAACCTGAAGATATGTACAGGATTATTGAGCACTTTGCCCTTGGAAGGAGGAGACTAGAACTATTCGGTGAAGACCACAATATCCGGGCTGGCTGGCTGACTGTTGGTAAAGAGTTGTCGTCTTCAAATTTTAATAAAGAGGCATACGTTAAAAGCTTTTCTGACAAAGATGGGAAAGTTTGGCAAGGAGGTGGGGGAAGAAATCCACCTCCGGAGGCACCTCATCTGGTGGTGACTACTCCTGATATAGAGGCTCTGAGGCCAAAGTCACCAATGAAGAACCAACAACAAATGCAGCAGCAGAATTCAGTATCCATTTCTTTGACGACAGGTGGGTCAAACAGAAGGCCTGCTGGGAATTCACCGCAGAACCCACCTGCACTTGGTGTCAACCAAGATGCATCAAACTCAAACCCTTCTACTCCAGCTCCTTGGGGTTCACCTTTGGAGGGCTTCAAGGGACGTGAAGGCTCTGTATTGCCCGCAGATGATAAAGTAATGGATATGTACGGGTTTCATGGACCACCATCTGCAGGCTATCTAGACTTTGAATCTTACAGACAAATGAATATGTTGTAG 3252 0.4766 MDSSDSGRGYSKRERDDEDWEFSDKRKDRSRKFGGNGDEGEGSDGGARRKRSSRTDNDDYDSRSKQGAKKRPEESTLEKLSSWYEDGELDDKAARKRAGDGDFHESMVSKEDGGGGGREKVGHEARSSRRKWDEVDANSARRSQDEKGEFRSGKRDSSRDRERSGSARSEHGEGKASGADRVVKSSGKEERRGDSERGKSKGKSDSVDAGREERVEKPRHHRAPAGYDGAETWDRSLNVEEDGHVRVRDKSARESGNSNRSRTPEKSGKRHQDLENSDVDFERSGSFKRKEHEGDGFKDDRSKGKDDTWNDRRKDRESSKESWKRRQPSSADKEKNEEGAFDDNRDWELPRHGYERMDNERPHGRFGGRKDVSRGEAVKTSTKFGISNDNYDVIEIQTKFYDYGKSESMSNHTKRNEAHQQFSAKSGVNDEDWAYHQDERGRKNDLSGDDLKERYTDDDYDFYGGRGRGQKGGVSARTTGGQSSSSGGSQPQYGNPESGSFNRAGPQGMKGNRVGRGGRIRPTGRDNQQVGMPLPMMGSPYGPLAMPPPGPMQPLSHGISPAPGPPMSPGVFLSPFTPAVWPGARGVDMNIIGVPPVSPVPPGPSGPRFNAANLGNPPNPAMYYNQSGPGRGIPPNINTSGFNPPGSMGRGAPPDKTPGGWAPPKSSGALGKAPSRGEQNDYSQNFVDTGMRPQNFIRELELTNVVEDYPKLRELIQKKDEIVAKSASAPMYYKSDLKEFELSHEFFGTKFDVILVDPPWEEYVHRAPGVADHMEYWTFEEIMNLKIEAIADTPSFIFLWVGDGVGLEQGRQCLKKWGFRRCEDICWVKTNKSNATPGLRHDAHTLFQHSKEHCLMGIKGTVRRSTDGHIIHANIDTDVIIAEEPPYGSTQKPEDMYRIIEHFALGRRRLELFGEDHNIRAGWLTVGKELSSSNFNKEAYVKSFSDKDGKVWQGGGGRNPPPEAPHLVVTTPDIEALRPKSPMKNQQQMQQQNSVSISLTTGGSNRRPAGNSPQNPPALGVNQDASNSNPSTPAPWGSPLEGFKGREGSVLPADDKVMDMYGFHGPPSAGYLDFESYRQMNML 1083
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00657 1083 Pfam MT-A70 751 929 IPR007757 -
Vian3g00657 1083 MobiDBLite consensus disorder prediction 980 1049 - -
Vian3g00657 1083 PANTHER N6-ADENOSINE-METHYLTRANSFERASE NON-CATALYTIC SUBUNIT 42 1046 IPR045123 -
Vian3g00657 1083 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 745 899 IPR029063 -
Vian3g00657 1083 MobiDBLite consensus disorder prediction 1 386 - -
Vian3g00657 1083 ProSiteProfiles mRNA (2'-O-methyladenosine-N(6)-)-methyltransferase-like (MT-A70-like) family profile. 525 1066 - -
Vian3g00657 1083 MobiDBLite consensus disorder prediction 631 645 - -
Vian3g00657 1083 ProSiteProfiles MT-A70-like family profile. 710 949 IPR007757 -
Vian3g00657 1083 MobiDBLite consensus disorder prediction 981 1035 - -
Vian3g00657 1083 MobiDBLite consensus disorder prediction 613 688 - -
Vian3g00657 1083 MobiDBLite consensus disorder prediction 406 533 - -
Vian3g00657 1083 MobiDBLite consensus disorder prediction 431 465 - -
Vian3g00657 1083 MobiDBLite consensus disorder prediction 1 377 - -
Vian3g00657 1083 ProSitePatterns N-6 Adenine-specific DNA methylases signature. 754 760 IPR002052 GO:0003676|GO:0008168|GO:0032259
Vian3g00657 1083 MobiDBLite consensus disorder prediction 475 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00657 Vian-Chr3 6664721 6672129 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00657 K23960 - gmx:100798100 1956.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00657 3 6664721 6672129 Vian3g00657 3 6664721 6672129 ECH