Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00656 ATGACACAATCCGTGGCAATGGCTTCTTCATCAATGTTGTGTCCGAGTGCTGTGTCGCATACAAAGTTCCGAGCTTTCCATCTCTCTTCAATGTTCACTCCACTGGGTCGAGGCCTTTTCTCGCCGTGGAGTGGTTTAAAGCATTTGGGCATCTCTGCTAAACCAAAACCTCTTCTTCACATAGCTAGAAAGGGGTGTAAGGGTATGGTGGTTTACGCTTCTCTCTTTGGGGTTGGAGCTCCTGAAGCTTTGGTGATTGGGGTCGTTGCTTTGTTGGTTTTTGGTCCTAAAGGTCTCGCTGAGGTTGCTCGAAATCTGGGAAAAACATTGCGTGCGTTTCAACCCACCATTAGAGAGCTTCAGGACGTTTCAAGGGAATTTAAGACTACGCTTGAACGGGAGATTGGTCTTGATGACAATATAAGTCCAACGCAGAACAGATACAACTCTAATGCAAGCAATACCAGATCAACATCATCATCCACAGTTGACCCTAACGGAACGCCAGACCCTAAGAATGCATACAGCTCTGAGGAATATCTTAAGATTACAGAGGAACAGCTGAAGGCATCTGCTGCACAACAGCAGGAGCAAACACCTCCCAAGGAACGCGAGGATGAGCCTCAAATCAAGCCACCTGCTAAGGAAACAGCCACTACTGTGCCTCCACCTCCACCGCAGAAGCCAGAAAGTGAGACGTTGCCTCTGGATTCATAG 717 0.4784 MTQSVAMASSSMLCPSAVSHTKFRAFHLSSMFTPLGRGLFSPWSGLKHLGISAKPKPLLHIARKGCKGMVVYASLFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFKTTLEREIGLDDNISPTQNRYNSNASNTRSTSSSTVDPNGTPDPKNAYSSEEYLKITEEQLKASAAQQQEQTPPKEREDEPQIKPPAKETATTVPPPPPQKPESETLPLDS 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00656 238 PANTHER SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATA, CHLOROPLASTIC 9 232 - -
Vian3g00656 238 MobiDBLite consensus disorder prediction 139 173 - -
Vian3g00656 238 PRINTS Bacterial sec-independent translocation TatB protein signature 75 95 - -
Vian3g00656 238 PRINTS Bacterial sec-independent translocation TatB protein signature 95 114 - -
Vian3g00656 238 FunFam Sec-independent protein translocase protein TATB, chloroplastic 75 124 - -
Vian3g00656 238 MobiDBLite consensus disorder prediction 217 231 - -
Vian3g00656 238 Pfam mttA/Hcf106 family 78 128 IPR003369 GO:0015031
Vian3g00656 238 Gene3D - 75 123 - -
Vian3g00656 238 MobiDBLite consensus disorder prediction 134 238 - -
Vian3g00656 238 NCBIfam twin-arginine translocase TatA/TatE family subunit 77 122 IPR006312 GO:0016020|GO:0043953
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00656 - - gmx:100799045 357.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00656 3 6660139 6663552 Vian3g00656 3 6660139 6663552 ECH