Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00629 ATGGCCAACGCGGCATCTGGAATGGCTGTTCTTGACGAGTGTAAATTAAAGTTCCTGGAGCTAAAGGCAAAGAGGAACTACCGTTTCATTGTGTTTAAGATTGAGAACTACGAAGTGATAGTGGAGAAACTTGGAAGCCCAGAAGAAACCTATGAGAACTTCACTGCATGTCTGCCTGCCAATGAGTGCCGATACGCTGTCTTTGATTTTGATTTCACAACAAATGAAAACTGCCAGAAAAGCAAGATTTTCTTCATTGCATGGGCTCCGGATACGTCAAAGGTGAGAGAGAAGATGGTGTATGCCAGCTCCAAGGACAGATTCAAGAGGGAACTTGATGGCATTCAGGTTGAGTTGCAAGCAACGGATCCCAGTGAGATGAGCTTTGATATCATAAAAGCAAGGGCAATATAA 414 0.4372 MANAASGMAVLDECKLKFLELKAKRNYRFIVFKIENYEVIVEKLGSPEETYENFTACLPANECRYAVFDFDFTTNENCQKSKIFFIAWAPDTSKVREKMVYASSKDRFKRELDGIQVELQATDPSEMSFDIIKARAI 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00629 137 PANTHER COFILIN-RELATED 2 136 IPR017904 GO:0015629|GO:0030042
Vian3g00629 137 FunFam Actin-depolymerizing factor 2 1 137 - -
Vian3g00629 137 Pfam Cofilin/tropomyosin-type actin-binding protein 14 134 IPR002108 GO:0003779
Vian3g00629 137 SUPERFAMILY Actin depolymerizing proteins 2 135 - -
Vian3g00629 137 Gene3D Severin 1 137 IPR029006 -
Vian3g00629 137 SMART adf_2 12 137 IPR002108 GO:0003779
Vian3g00629 137 CDD ADF_cofilin_like 6 136 IPR017904 GO:0015629|GO:0030042
Vian3g00629 137 ProSiteProfiles ADF-H domain profile. 5 137 IPR002108 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00629 Vian-Chr3 6341135 6342597 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00629 K05765 - ahf:112779196 254.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00629 3 6341135 6342597 Vian3g00629 3 6341135 6342597 ECH