Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00628 ATGCCAATAGCTGCCCCTAAAGATCATGGTGGAAGAAGATCACACACACAGACACACCCACAAATAAAAGAAGATATCCACAACCGCACGCCTTACTTCTATTACAAAGGCCACACAAGTTTTCGACCCTTCATTACCCTTTTTCTTCTTTTCACGCACATCTTCCTCTTCACAATGGAGGCTCAGCAGAAGGTGGTATTAAAGGTCCTTACTATGATAGATGAAAAAACAAAGAAGAAAGCAATAGAAGCAGCTGCAGATATCTATGGGGTTGATTCGATAGCTGCAGATGTGAAGGAACAGAAGTTGATAGTGGTTGGCGAAATGGATGCAGTGGCGGTGGTGAAGAAGCTGAAGAAAGTAGGGAAGGTAGATATAATATCAGTTGGACCTGCAAAGGAAGAGAAGAAAGAAGAAAAGAAAGAGGAAAAGAAAGAGGAAAAGAATGAAGAGAAGCCAGAAGAGAAACCGGAAGAGAAAAAATAA 486 0.4136 MPIAAPKDHGGRRSHTQTHPQIKEDIHNRTPYFYYKGHTSFRPFITLFLLFTHIFLFTMEAQQKVVLKVLTMIDEKTKKKAIEAAADIYGVDSIAADVKEQKLIVVGEMDAVAVVKKLKKVGKVDIISVGPAKEEKKEEKKEEKKEEKNEEKPEEKPEEKK 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00628 161 ProSiteProfiles Heavy-metal-associated domain profile. 63 126 IPR006121 GO:0046872
Vian3g00628 161 PANTHER COPPER TRANSPORT PROTEIN FAMILY-RELATED 63 152 - -
Vian3g00628 161 Coils Coil 130 152 - -
Vian3g00628 161 Gene3D - 58 135 - -
Vian3g00628 161 MobiDBLite consensus disorder prediction 1 22 - -
Vian3g00628 161 SUPERFAMILY HMA, heavy metal-associated domain 62 123 IPR036163 GO:0046872
Vian3g00628 161 MobiDBLite consensus disorder prediction 8 22 - -
Vian3g00628 161 MobiDBLite consensus disorder prediction 132 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00628 Vian-Chr3 6328610 6332225 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00628 - - pvu:PHAVU_007G070000g 138.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00628 3 6328610 6332225 Vian3g00628 3 6328610 6332225 ECH