Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00626 ATGGATTCAAGAGTAGTTCGAAGTGAAGTGCAGGAGAATGATGAACACTACCCCCACATTGTTCCCTTAGAGCAAGTAACACATGGTGAAGAAGATCAACACTTTGATCATGAGAAGAAGTCTGTTCTGAATAAAGTCAAGGTAAAGGCTAAGAAAATCAAGGACACGATTAAGAAACATGGCCATCAAGTCCTTGATCGTGGCCGTGAGTATAACAATGAAGATCAACACAACCTTGATGATGATGACTTAGATGAGGATGAAGACACGGACAAGGACACACAAGTTCATGAAACACCAATTCATGAAAGTGAAGATGTTAAAATTGTTACACCCACAAATTTGATGGTTAAATTAATAAAATTGGATTTGACTCCTCTTGATGATATTTATATACCGTGGTCTGGATTAAGATTTTCATGTGTGATGGCTACAGCAGTAAAAGAAGAAATGGAAATCACACCGGTTGAGGAATCTTTTGCAAGAATGAATGTGCAGGAGGAGCCAAAATCTATTTCAGAACTAAACCTGCAGCCTGCTATTGTTGATTCTGAATGCCCTCGTGTTGAAAACCATGATCAGTCCGTGCCACACCTTTCTGCTGCGATTCAAACTCAGTGTCCTTCTTCTGAATGTCATGAGCAAACGATATCCCCCAATGTCAACAAAAACCTGGAAAATGTCACAGACAGTGGACAAACTTTAAGCACCATCACAACCGCAGTTGATGAACACTCTTGTTATAAAGTTTTCTCTCCTAAAGATGTCACAGCTTCTGAGGAAGGTTCAGTAGAGAAAGACGAAAGAAAGGACAACGTGGTAATAAATGAAGAGCAACCAAAAAGTAGGGATGCTTCTAACATGTCTGGCTCGACTACACAGTATGGGAAGGACATTGCTGACTCTCTGACACAGAAATTAGGTCCAGTTTATGACAAGGTTGCAGGTGTAGGAAGTGCAGTGAAGTCCAAAGTGTATGGAACTGAGACAAAAAATGAGGTCAAAGAACAAGACAAAGGGGTTTCTGTGAAGGAGTATTTGGCTGAGAAGCTAAGGCCTGGTGAAGAGGACAAGGCACTTTCTGAGGTAATTTCTGAAACTTTAAGTAAGAGGAAGGAAGAGACAGTGAAAAATGAGCATCACTTGGATGGTGGGGATGAGAAAATGCGTGAAGAGAGCTGTGTGCATGATCCAGGAAAAGGTGTGGTTGACAAGCTTAAAGGTGTTGTTGGCTCATGGTTTGGCAAATTTGAGGGAAAAGGAGGTGAACATTTATCCAAGAATACAAATTCTGGTGCAGAAGTGGAACAGGTTAGCCCAGTTGTTGGTGAAAGCAAGAGTAGTCGAATTGAAGAAACAGAGACTCGCTAA 1371 0.4114 MDSRVVRSEVQENDEHYPHIVPLEQVTHGEEDQHFDHEKKSVLNKVKVKAKKIKDTIKKHGHQVLDRGREYNNEDQHNLDDDDLDEDEDTDKDTQVHETPIHESEDVKIVTPTNLMVKLIKLDLTPLDDIYIPWSGLRFSCVMATAVKEEMEITPVEESFARMNVQEEPKSISELNLQPAIVDSECPRVENHDQSVPHLSAAIQTQCPSSECHEQTISPNVNKNLENVTDSGQTLSTITTAVDEHSCYKVFSPKDVTASEEGSVEKDERKDNVVINEEQPKSRDASNMSGSTTQYGKDIADSLTQKLGPVYDKVAGVGSAVKSKVYGTETKNEVKEQDKGVSVKEYLAEKLRPGEEDKALSEVISETLSKRKEETVKNEHHLDGGDEKMREESCVHDPGKGVVDKLKGVVGSWFGKFEGKGGEHLSKNTNSGAEVEQVSPVVGESKSSRIEETETR 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00626 456 MobiDBLite consensus disorder prediction 77 92 - -
Vian3g00626 456 MobiDBLite consensus disorder prediction 424 446 - -
Vian3g00626 456 PANTHER LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED 1 437 IPR037491 GO:0009737
Vian3g00626 456 MobiDBLite consensus disorder prediction 279 295 - -
Vian3g00626 456 MobiDBLite consensus disorder prediction 417 456 - -
Vian3g00626 456 MobiDBLite consensus disorder prediction 256 295 - -
Vian3g00626 456 MobiDBLite consensus disorder prediction 371 400 - -
Vian3g00626 456 MobiDBLite consensus disorder prediction 59 103 - -
Vian3g00626 456 MobiDBLite consensus disorder prediction 259 278 - -
Vian3g00626 456 MobiDBLite consensus disorder prediction 59 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00626 Vian-Chr3 6316060 6318695 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00626 - - var:108325293 689.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00626 3 6316060 6318695 Vian3g00626 3 6316060 6318695 ECH