Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00617 ATGTCTGTGCAACTGTGGGAGACCTTGAAGGAGGCCATAGTGGTCTACACTGGCCTAACTCCTTCCACCTTCTTCACGGTGCTCGCCCTAATTCTGGCCGTTTACTACTTCGTTTTGGGTCTCTTTGGGACTCAACCGGAGCGCCCCCGCCCCCGTCACACCGAGGAGGAGGAGATGCCGCCTCTGCGGCCGCCGGTCCAGCTCGGTGAGATAACGGCTGAGGAGCTCAAAGCCTACGACGGCAACGATACGGGTAAACCCTTGCTTATGGCCATCAAGGGACAGATCTACGATGTCTCCCAGAGCAGGATGTTTTATGGTCCTGGTGGACCTTATGCTCTATTTGCTGGAAAGGATGCCAGCAGGGCTTTAGCAAAGATGTCTTTTGAAGAGAAAGATTTGACTGGGGATATTTCTGGACTTGGCCCATTTGAGCTTGATGCTTTACAAGATTGGGAATATAAGTTCATGAGCAAGTATGTAAAGGTTGGAACTGTCAAAAGTGAACTTCCTGTAACTGAATCAGAGTCCACCGCAGAACCATCAGAAACTACTTCCCGTGATATTGATACTGCTTCTGCTGTCAAGCCCAATGAAGATGGCAAATCAGAAATTGGTGCTGTTAAAAGTGAAGAAACCCCTTCAAACATTGATGCAGAAAAAGAGAACATTGATCCAGGAAAAGAAGAGTGA 693 0.4863 MSVQLWETLKEAIVVYTGLTPSTFFTVLALILAVYYFVLGLFGTQPERPRPRHTEEEEMPPLRPPVQLGEITAEELKAYDGNDTGKPLLMAIKGQIYDVSQSRMFYGPGGPYALFAGKDASRALAKMSFEEKDLTGDISGLGPFELDALQDWEYKFMSKYVKVGTVKSELPVTESESTAEPSETTSRDIDTASAVKPNEDGKSEIGAVKSEETPSNIDAEKENIDPGKEE 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00617 230 MobiDBLite consensus disorder prediction 214 230 - -
Vian3g00617 230 Gene3D - 69 167 IPR036400 -
Vian3g00617 230 MobiDBLite consensus disorder prediction 169 230 - -
Vian3g00617 230 SMART Cyt_b5_2 71 167 IPR001199 -
Vian3g00617 230 Pfam Cytochrome b5-like Heme/Steroid binding domain 72 166 IPR001199 -
Vian3g00617 230 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 62 167 IPR036400 -
Vian3g00617 230 MobiDBLite consensus disorder prediction 193 207 - -
Vian3g00617 230 PANTHER MEMBRANE-ASSOCIATED PROGESTERONE RECEPTOR COMPONENT-RELATED 21 179 - -
Vian3g00617 230 MobiDBLite consensus disorder prediction 170 192 - -
Vian3g00617 230 FunFam Membrane steroid-binding protein 1 69 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00617 Vian-Chr3 6228858 6230843 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00617 K17278 - gmx:100791779 348.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian8g01091 8 28764340 28767959 Vian3g00617 3 6228858 6230843 PCT