Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00616 ATGAAGGGACATGTAAGATGGAATGAGGCTAATATTGGAGAAATTGAAGCAAATAAACCCGTGAGGCAAAAAATTACTGAACCTAAGACTCCGTATCATCCTACGATTGATGATGAAAGTTCTCCATCCCCTGTTCGAGGAGGCTTTGACGAATGTATTGAAATTGAAGATCAAGATGACTCTGCCAATTCTGAAGGAAATGCTTTCAATAATGCGCTCTCTTCTAGCAGAACAGGAACTAAACAATCTGATGGCTGGACATCATCTGAGGATGAGGTGCAAGAAACTGAAGACGAGGAAGGACTTCGTACAGCTTCAGTCCTCACCGAGAACTCGGGGCAGTTTTTTCATACTGCACCCTGGGACCAAGAGGCTGGAGCCCACTATGATGAATTCCTCAAAGTCAAAGAACTGCAACAGAATGCTTCTATCCTAGAGGATGCAAGTGACGAGGATAACGGCGCTGAGCATACCAAGAGGGAGGGGGAAAATGGCTCAACTTCTTCAACGAGCCCTCCCTGA 522 0.454 MKGHVRWNEANIGEIEANKPVRQKITEPKTPYHPTIDDESSPSPVRGGFDECIEIEDQDDSANSEGNAFNNALSSSRTGTKQSDGWTSSEDEVQETEDEEGLRTASVLTENSGQFFHTAPWDQEAGAHYDEFLKVKELQQNASILEDASDEDNGAEHTKREGENGSTSSTSPP 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00616 173 MobiDBLite consensus disorder prediction 143 173 - -
Vian3g00616 173 PANTHER PROTEIN PHOSPHATASE INHIBITOR 2 169 IPR007062 GO:0004864|GO:0009966|GO:0043666
Vian3g00616 173 MobiDBLite consensus disorder prediction 62 89 - -
Vian3g00616 173 MobiDBLite consensus disorder prediction 18 103 - -
Vian3g00616 173 Pfam Protein phosphatase inhibitor 2 (IPP-2) 5 148 IPR007062 GO:0004864|GO:0009966|GO:0043666
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00616 Vian-Chr3 6209939 6211479 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00616 K16833 - gmx:100788300 181.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00616 3 6209939 6211479 Vian3g00616 3 6209939 6211479 ECH
Vian8g01108 8 29122651 29130173 Vian3g00616 3 6209939 6211479 PCT