Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00613 ATGGTGGAGTTGGTGTTGTTGTACAAGAACCCATTGCTCCACGCATCACTCTCCCTGATCCTCGTCTTCACCTTCGCCTTCTTCAAAATTCCCCTCCTTTTCCTTCATGCTCTCCAGACCTACATCCACCCCGATTCCCAACCCCAATCCAATGGCCTCAGAGCCGCCATCCGTCGCCCCGGCATCGACGGCTACCAGCCCCTCTCCTCCAAAACCGCCGCCGAACTCAAGAAGAGGAACAAGTCCAACAAGGACAAGCCCGATTTTGACGAAAACAATGCCCAGATCTTCAGACTCACGCTCGACCATGCACATCTCCAGTCCCGACTCTTCGTCGATCAGTACTGCGTCGCTTTCACTCTCTCCTTCGCTGCCCTTTTCTCCCTCTTGCTCCACCACTTCCTCCAATCGCCCCCGAATAATGGGTTCTTCGCCAACGGGGCTTTCGTTCCCATTCTTTTATCAATTTTGAGTCTTTACATGTGGGGGACGTTGCTCATTAAGGTCACGTTCGAGAGATCCGCGTCCAGGAGGTCCGACAAGCAATTGAGCATTTTTTTTGGGGTTTTGGGGCTTTGCTTTGGGCTTTTGTTTCTTCCTGAGGGCGTGTCTTCGGTTTTGGAGTTCCATTTTGAGGCTCCTATCGATGGGTTTTTGAGGGTTTTCGTTGCTGCATTGATGGGGTTCCTTGCGGGGTGTTTGTTCATTCCGGCTTCTAGAAGTGCTCGTTGTTTTTGGCTTGGGACTGATCAGATAGGTTGCAATTTGTCGATGATAACTTGTGGGTGGTTTACTCGTGCGATCCTTTATGCAAATCAGGTGTTAGTTATATTTGTAGCTCTGTTGTGGATAAGCCCCTTGGCTGAGATTTTTGTGAATAGTGGAGATGGTGCGGCAAAGAGTGGATTTGGTAATGCGGAGAAATTGGTGGGGAAAATGGGGTTCTTGCCTTCTGATTTTGGTAGCTTTAGGAAGTGGTGCTTGTTGGGTTCTAGTTTGTTGCAGATTGTGGCTTTGAGGCCTAACCTGCAGATGTATCTGAATGAAGCTTTGTTATCTTGGTACCAAAGGCTTCATGCTAGCAAGGTTCCTGACTTGGATTATAGTAGGGCAAAGATGTTTCTTCATAATCACTACTTGTGCCTTGTGGTTTTGCAGTTCCTTGCCCCTCCTGTGCTGGTTCTTATCTTTCTTGGCTTGTCACATATTGATGGTGGTTCTTTTGGAAATCTTACGATGTTGAGTGATTTACTGCCCAGGTTTGCTTTCATCAGGGAAGTGACTTTGTTTTTGGCTTGGTGGGTAACCTTCCTCTGGGCACTGTTCTCCTCGGCGATCCTTATGCTACATCGCCACTGTGTTTTATATGTTTCTTGA 1377 0.4808 MVELVLLYKNPLLHASLSLILVFTFAFFKIPLLFLHALQTYIHPDSQPQSNGLRAAIRRPGIDGYQPLSSKTAAELKKRNKSNKDKPDFDENNAQIFRLTLDHAHLQSRLFVDQYCVAFTLSFAALFSLLLHHFLQSPPNNGFFANGAFVPILLSILSLYMWGTLLIKVTFERSASRRSDKQLSIFFGVLGLCFGLLFLPEGVSSVLEFHFEAPIDGFLRVFVAALMGFLAGCLFIPASRSARCFWLGTDQIGCNLSMITCGWFTRAILYANQVLVIFVALLWISPLAEIFVNSGDGAAKSGFGNAEKLVGKMGFLPSDFGSFRKWCLLGSSLLQIVALRPNLQMYLNEALLSWYQRLHASKVPDLDYSRAKMFLHNHYLCLVVLQFLAPPVLVLIFLGLSHIDGGSFGNLTMLSDLLPRFAFIREVTLFLAWWVTFLWALFSSAILMLHRHCVLYVS 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00613 458 PANTHER RE42071P 12 455 IPR019395 -
Vian3g00613 458 Pfam Predicted transmembrane protein 161AB 218 397 IPR019395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00613 Vian-Chr3 6196975 6198351 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00613 - - gmx:100793355 750.355
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00613 3 6196975 6198351 Vian3g00613 3 6196975 6198351 ECH