Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00608 ATGGCCAGAAGAGATCTTGAGAGTGGCGGTGGGAGAACCAAGAACAACAGAACAGAGGAAAACTACACTGCACATGAATCTTCTAATCTTTACGAAGCTGATACCCATTGGACATCATGGCTGGTTCCTATGTTTGTGGTTGCTAATATTGCTGTTTTTGTTGTTTCCATGTACATCAACAATTGTCCCAAGAATAACCTCGGTCTCCAAGGTGGCTGCGTGGCCAAGTTCCTTGGAAGGTTCTCCTTCGAACCTATGCAGGAGAATCCGTTGCTTGGTCCTTCTTCTTCAACATTGACCAAGATGGGAGCCCTTCGGTGGGATAATGTTGTGAACGGGCATCAAGGATGGAGACTTGTCACTTGCATTTGGTTACACGCTGGGATTATTCATTTGCTTGCTAACATGTTGAGTCTGGTATTCATTGGGATTCGTCTGGAACAGCAATTCGGGTTTGTGAGGATTGGAGTTATATACCTGGTGTCTGGGTTTGGTGGAAGTGTTCTGTCGTGTCTGTTTATCAGAGACCACACTTCGGTGGGTGCTTCTGGTGCCCTTTTTGGACTTCTTGGCGCAATGCTATCTGAACTTATCACAAACTGGACTATATATTCCAACAAAGCAATGGCATTACTCACCCTTCTAGTGATCATTGTGATCAACCTTGGCATTGGCATTTTGCCACACGTGGATAACTTTGCTCACATTGGAGGATTCGTGGTGGGATTTCTCCTTGGTTTTATTTTGTTGCCTCGTCCTCAGTTTGGATGGTTAGAGCAGCGTCGACTTCCTGCCGGTGTGCGTTTGAAGTCTAAGTACAAAGCTTACCAATATGTTTTATGGATAGTGTCTCTTGTTCTGTTGGCTGCAGGGTTAGCAATTGCATTGGTGATGCTATTCCGGGGTGAGAAAGGGTATGATCACTGCCATTGGTGTCGGTACCTAACATGTGTCCCGACCTCTAAATGGGAATGCAGCAATGGCAGTTAA 990 0.4556 MARRDLESGGGRTKNNRTEENYTAHESSNLYEADTHWTSWLVPMFVVANIAVFVVSMYINNCPKNNLGLQGGCVAKFLGRFSFEPMQENPLLGPSSSTLTKMGALRWDNVVNGHQGWRLVTCIWLHAGIIHLLANMLSLVFIGIRLEQQFGFVRIGVIYLVSGFGGSVLSCLFIRDHTSVGASGALFGLLGAMLSELITNWTIYSNKAMALLTLLVIIVINLGIGILPHVDNFAHIGGFVVGFLLGFILLPRPQFGWLEQRRLPAGVRLKSKYKAYQYVLWIVSLVLLAAGLAIALVMLFRGEKGYDHCHWCRYLTCVPTSKWECSNGS 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00608 329 MobiDBLite consensus disorder prediction 1 21 - -
Vian3g00608 329 PANTHER RHOMBOID-RELATED 14 325 IPR002610 GO:0004252|GO:0006508|GO:0016020
Vian3g00608 329 SUPERFAMILY Rhomboid-like 37 254 IPR035952 -
Vian3g00608 329 Gene3D - 35 252 IPR035952 -
Vian3g00608 329 Pfam Rhomboid family 112 253 IPR022764 GO:0004252|GO:0016020
Vian3g00608 329 FunFam RHOMBOID-like protein 35 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00608 Vian-Chr3 6119313 6122262 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00608 - - gmx:100784224 564.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00608 3 6119313 6122262 Vian3g00608 3 6119313 6122262 ECH