Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00604 ATGGCCAATACTGATTCTTCTTCCCCCACCATTTTCAACGTAAGAAAAACGCCAACCTTCATCCTCCTTCTTCTTCTCTGCATCGCCTCCTACTTCCTCGCCGCGTACCACCAAGGAGCGCCCCTCCTCACCACCGCCTCCCTCTACCTCTCCGCATCGTGCAACCACCTCACTGCCCAGACTTCTAGAACGTGTGAACCAATGTCTACTTATCCTAGAACTTATGATCTAATTCATGCTGATTCAGTGTTCAGTCTTTACAGTAACAGATGTGAGTTGGAAGACATTCTGTTAGAAATGGATAGGATTGTTCGACCCGAAGGATGTGTTATCATACGAGATGACGTTGATATGTTGGTCAGAGTAAAGAGCATTGTGAATGGATTGGAATGGGACAGTATAATTGTAGACCATGAAGATGGGCATCTTGAGAAGGAGAAAGTTCTATTTGCTGTAGGGGTACATGCGAGCACTTTTTTTGCAATGCAAAATATAACTGTGAAAAGTGCAACTTCTAGGGCTATGGGCGTTGAGCATCACCCAATTACCGCTGGGCGCTCCTTTGACAAAGAGCTCCAAAAGGAGATTGCGTTGGACACTGACGAAGAGGCGCTGGGTGCACGAGAGGGACGTTAG 636 0.4686 MANTDSSSPTIFNVRKTPTFILLLLLCIASYFLAAYHQGAPLLTTASLYLSASCNHLTAQTSRTCEPMSTYPRTYDLIHADSVFSLYSNRCELEDILLEMDRIVRPEGCVIIRDDVDMLVRVKSIVNGLEWDSIIVDHEDGHLEKEKVLFAVGVHASTFFAMQNITVKSATSRAMGVEHHPITAGRSFDKELQKEIALDTDEEALGAREGR 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00604 211 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 64 147 IPR004159 GO:0008168
Vian3g00604 211 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 63 151 IPR004159 GO:0008168
Vian3g00604 211 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 66 132 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00604 Vian-Chr3 6093975 6098614 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00604 - - gmx:100778314 165.236
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00604 3 6093975 6098614 Vian3g00604 3 6093975 6098614 ECH