Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00601 ATGGCCTCCTTAAGCTGTCACTTTCATACCACCAACTTGTTGAATTCTAAGAATGTCAATAGCGGGAAGAAGAAACGTTTCATATCTTGCTCAGCGCAGCCTACACAAAGCAATATTAAGGTTGTGATTAATGGGGCAACCAAGGAAATAGGAAGGGCAGCAGTAGTTGCAGTGACTAAGGCTAGAGGAATGGAAGTTGCAGGAGCTGTGGATACTTGTCATGTTGGGGAAGATATTGGAAAGGTCTGTGGCATGGAAGAGCCCCTTGAAATACCCATAATAAATGACCTTACTTTGATTTTGGGCTCTATATCTCAGTCCAAGGCACCGGGAGTTGTAGTTGATTTCACCGACCCTTCCTCAGTATATGAAAACGTAAAGCAGGCAACAGCATTTGGCATGAAAAGCATAGTTTACGTGCCTCGAATCAAATTAGACACGGTGGCTGCATTATCTGCACTCTGCGAGAAGGCCACCATGGGTGTTTTGGTTGCACCAACCCTTTCCATAGGATCAATATTACTGCAACAAGCTGCGATTTCAGCTTCTTTCCATTACAGCAACGTCGAAATTGTGGAGTCCAGGGCTAATGCAAAAGAGCTTCCATCAGCAGATGCAAACCAAATTGCCAACAATCTCTCCAACATAGGACAAATCTATAACAGAGAAGACTCTTCAACAGATGTCCTGGCAAGGGGTCAAGTCCTTGGAGATGGAATTCGTGTTCACAGCTTGGTCCTCCCAGGACTTCCTTCTAGTACAGCAGTTCACTTCTCTGGTCCAGGAGATGTTTACTCTATCAAGCATGATATCACAGATGTGCAGTGCCTCATGCCAGGCTTGCTCTTAGCCATTAGAAAAGTAGTGCGTCTCAAGAATTTGGTATATGGCCTGGAGAAGTTTATATGA 909 0.4455 MASLSCHFHTTNLLNSKNVNSGKKKRFISCSAQPTQSNIKVVINGATKEIGRAAVVAVTKARGMEVAGAVDTCHVGEDIGKVCGMEEPLEIPIINDLTLILGSISQSKAPGVVVDFTDPSSVYENVKQATAFGMKSIVYVPRIKLDTVAALSALCEKATMGVLVAPTLSIGSILLQQAAISASFHYSNVEIVESRANAKELPSADANQIANNLSNIGQIYNREDSSTDVLARGQVLGDGIRVHSLVLPGLPSSTAVHFSGPGDVYSIKHDITDVQCLMPGLLLAIRKVVRLKNLVYGLEKFI 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00601 302 Pfam Dihydrodipicolinate reductase, N-terminus 39 166 IPR000846 GO:0008839|GO:0009089
Vian3g00601 302 PIRSF DHPR 37 302 IPR023940 GO:0008839|GO:0009089
Vian3g00601 302 PANTHER DIHYDRODIPICOLINATE REDUCTASE 16 302 IPR023940 GO:0008839|GO:0009089
Vian3g00601 302 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 38 193 IPR036291 -
Vian3g00601 302 FunFam Dihydrodipicolinate reductase family protein 38 195 - -
Vian3g00601 302 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 169 273 - -
Vian3g00601 302 Gene3D - 38 195 - -
Vian3g00601 302 NCBIfam 4-hydroxy-tetrahydrodipicolinate reductase 39 302 IPR023940 GO:0008839|GO:0009089
Vian3g00601 302 Pfam Dihydrodipicolinate reductase, C-terminus 174 301 IPR022663 GO:0008839|GO:0009089
Vian3g00601 302 FunFam Dihydrodipicolinate reductase, C-terminus family protein, expressed 169 272 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00601 K16908 - gmx:100782083 540.806
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00601 3 6068587 6071096 Vian3g00601 3 6068587 6071096 ECH