Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00595 ATGGGTTCCTCTGCTGCCAGAAAAAACATTGCAGATTCAGCGTCCTGGTACTGTGCCATGATGCTGTTGGGCATGATTCTGTTGGGGTCTGTAAGGGAAAGCGTTGTGGCAGGAGAAGGTAAGGCTGTAAAAGGGAACAACCTCCGGGAAGGACCGTGTGATGAAATCTACGTTGTGGGAGAAGGAGAGACCCTGCACACAATCAGCGACAAGTGCAATGACCCGTTTATCGTGGAGCGGAACCCGCATATCCATGACCCGGATGACGTTTACCCTGGCCTTGTCATCCAAATCATCTCTACCCGTCAATCCTGA 315 0.5143 MGSSAARKNIADSASWYCAMMLLGMILLGSVRESVVAGEGKAVKGNNLREGPCDEIYVVGEGETLHTISDKCNDPFIVERNPHIHDPDDVYPGLVIQIISTRQS 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00595 104 PANTHER EMBRYO SAC 1 7 102 - -
Vian3g00595 104 CDD LysM 56 98 IPR018392 -
Vian3g00595 104 Gene3D LysM domain 49 104 IPR036779 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00595 Vian-Chr3 5950483 5950797 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00595 - - pvu:PHAVU_007G066300g 183.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00595 3 5950483 5950797 Vian3g00595 3 5950483 5950797 ECH