Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00593 ATGGGTTGGACGTTGGATAAATTTATATGGGCACTTCTTGTTGAGTGCATATTGCTTTCTGGTTTATCTCATTCTGGTAAAGCTTCAAAGTACGCATTTGTAAGAGAAGCAACATCTGCTCCACCATTCTTGTCTTATGACTACATTGTCATTGGTGGAGGAACAAGTGGGTGTCCCCTTGCAGCAACTCTCTCACAGGGTGCAAGAGTTTTAGTCCTTGAAAGAGGAGGTTCTCCTTACACAAACCCAGAGCGAATCCACCTAAAGAACTTTGTCAATTCCCTCGCTGACATAAGCCCTTCATCTTTTTCCCAACCGTTCATATCCACAGATGGGGTCCTCAATGCCAGGGCTCGTGTTCTGGGTGGTGGCTCGGTGTTGAATGCAGGCTTCTATTCAAGGGCTAGCTCTGACTACATAAGGATTTCTGGTTGGAATGAGTCTTTGGCTGAGGAATCGTATAAATGGGTTGAAAAGAAAGTGGTTTTTGAGCCCCCTATGCTGCAGTGGCAGTCAGCAGTGAGAGATGGGTTGCTGGAAGTAGGCGTGTTGCCTTATAATGAATTTACTTATGATCACTTAAATGGGACGAAGATTGGAGGGACAATTTTTGATAAGAAGGGTAACAGGCACACTGCAGCTGATTTGTTAGATAAGAGTGATGGCAATGCGTTTGAATATTCTTTTACAGGAAAAAGAAGACCAGAAGCTTATGGAGTAATATTCATAGATGCAATGGGAGTGATGCATAGAGCATACTTAAACAGAAAAGGAAAGAATGAGATAATCTTATCAGCTGGGGCAATTGGAAGCCCACAGTTGTTGATGCTGAGTGGGATTGGTTCTGCTAAACATCTGCAGGCTCATGGAATCACGGTGGTTTTGGATCGGCCCTGGGTGGGTCAAGACATGGCAGATAATCCAATGAACGTTCTGGTGGTTCCTTCCCCTTTGCCTGTTGAAGTCTCTCTGGTCCAAACAGTGGGCATCACAAAGTCTGGTAGCTTCATTGAAACAGGCAGTGGATTAAGTTTGGGCCCTTCTTGGTCTGAAAGACTTCAAAAGATTTTTGAATTTGTGTCAAACCAGTCTGGTCAGCCTTCGACGTTTTCCTCAGAAAACACGCAGAGGGTTGCAGACTTGGTTAGATTTTTAACGGGTCCAACTCTGAAAGGAGGAATCATTATTGAAAAGATCACAGGACCACGATCCACAGGTCATTTGGAGCTCATAACCACAAATCCTAGTGATAATCCATCAGTTACCTTTAATTATTTCAAGGATCCAGAGGATTTGAGAATCTGTGTTGAAGGCATGAAAACCATCATTGATGTGGTAAACTCAAAAGCATTATCAAAGTTCCGGTACCCCAACTTGCCAGTCCAAGCTCTATTGAACTTGATGTTGCTGATACCAATGAACTTGAGGCCAAAACATGTCAATACTGCTTATTCTTTACAACAGTATTGCATAGACACTGTGCTAACAATTTGGCATTACCATGGAGGGTGCCTCACTGGTAAAGTTGTTGATCATGATTATAAGGTTATTGGGGTCGAAGCTCTGAGGGTAATTGATGGATCCACCTTTTATCGCTCACCTGGAACTAATCCTCAAGCCACTGTCATGATGCTTGGAAGGTACATAATTATTGGAATACTTTAG 1665 0.4306 MGWTLDKFIWALLVECILLSGLSHSGKASKYAFVREATSAPPFLSYDYIVIGGGTSGCPLAATLSQGARVLVLERGGSPYTNPERIHLKNFVNSLADISPSSFSQPFISTDGVLNARARVLGGGSVLNAGFYSRASSDYIRISGWNESLAEESYKWVEKKVVFEPPMLQWQSAVRDGLLEVGVLPYNEFTYDHLNGTKIGGTIFDKKGNRHTAADLLDKSDGNAFEYSFTGKRRPEAYGVIFIDAMGVMHRAYLNRKGKNEIILSAGAIGSPQLLMLSGIGSAKHLQAHGITVVLDRPWVGQDMADNPMNVLVVPSPLPVEVSLVQTVGITKSGSFIETGSGLSLGPSWSERLQKIFEFVSNQSGQPSTFSSENTQRVADLVRFLTGPTLKGGIIIEKITGPRSTGHLELITTNPSDNPSVTFNYFKDPEDLRICVEGMKTIIDVVNSKALSKFRYPNLPVQALLNLMLLIPMNLRPKHVNTAYSLQQYCIDTVLTIWHYHGGCLTGKVVDHDYKVIGVEALRVIDGSTFYRSPGTNPQATVMMLGRYIIIGIL 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00593 554 SUPERFAMILY FAD/NAD(P)-binding domain 45 550 IPR036188 -
Vian3g00593 554 SUPERFAMILY FAD-linked reductases, C-terminal domain 305 503 - -
Vian3g00593 554 Gene3D - 46 546 IPR036188 -
Vian3g00593 554 Pfam GMC oxidoreductase 233 308 IPR000172 GO:0016614|GO:0050660
Vian3g00593 554 Pfam GMC oxidoreductase 46 148 IPR000172 GO:0016614|GO:0050660
Vian3g00593 554 Pfam GMC oxidoreductase 402 547 IPR007867 GO:0016614
Vian3g00593 554 PIRSF Alcohol_oxidase 28 549 IPR012132 GO:0050660
Vian3g00593 554 ProSitePatterns GMC oxidoreductases signature 2. 267 281 IPR000172 GO:0016614|GO:0050660
Vian3g00593 554 PANTHER OSJNBA0019K04.7 PROTEIN 10 553 - -
Vian3g00593 554 Gene3D - 163 496 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00593 Vian-Chr3 5918411 5920641 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00593 7 549 Miscellaneous Gene Families AT5G51950 56.738 0.0 644
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00593 - - vun:114192811 993.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00593 3 5918411 5920641 Vian3g00593 3 5918411 5920641 ECH