Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00588 ATGTCGGAGGGGCCAACACCAACGAGGAAGAGGAAAATGGGAGACGCAGAGGATATAACTCCCAAGAAACCTGCGGCAAAATGGCCTCTCATCAAACCCAAAAAGAATCTTCAGATTACCCGACTCCGAGATTTCGATCTCTTCACGGTCCAGAATTTTTTCTCCTCTGCTGAATCGAAGGCATTCGTTAAAAATGCCGAGTTAATTGGTTTTGCTCATCAAGGGAGTCTAGGTCCTACTTATGGTGAAGCTTACAGAGATAATGATCGAATCTCGGTGGATGATCCTATCCTTGCAGATACTATTTGGGAGTCTGGACTTAGCAAACTATTCTCTGATATAAAAATTCGTGGAAAGGTTGCTGTAGGCCTGAATCCAAATATTAGATTCTATAGGTACAAGACTGGCCAGCGGTTTGGACGGCACATTGACGAAAGTGTTAATCTTGGAGATGGAAAACGCACTTATTATACTCTTCTAGTGTATTTGAGCGGTGGGCCTGGTGAACTTAAATCAAAGCCCAAAAATGACTCCGGCAATTCCTCAGTTCCATCTGTTGATCCTTTAGGTGGAGGAGAAACCGTCTTTTATGGTTCAAGAAATAAGATTGTGGCTGAGGTGTCTCCTATTGAAGGGACAGCACTTCTTCACCTTCACGGAGATAAATGTTTGTTGCATGAAGCCAGAAATGTTACCAAGGGTATCAAGTATGTCTTTCGTTCAGATGTAGTATTTGCTTGA 741 0.4291 MSEGPTPTRKRKMGDAEDITPKKPAAKWPLIKPKKNLQITRLRDFDLFTVQNFFSSAESKAFVKNAELIGFAHQGSLGPTYGEAYRDNDRISVDDPILADTIWESGLSKLFSDIKIRGKVAVGLNPNIRFYRYKTGQRFGRHIDESVNLGDGKRTYYTLLVYLSGGPGELKSKPKNDSGNSSVPSVDPLGGGETVFYGSRNKIVAEVSPIEGTALLHLHGDKCLLHEARNVTKGIKYVFRSDVVFA 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00588 246 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 123 246 IPR005123 -
Vian3g00588 246 SMART p4hc 45 244 IPR006620 GO:0005506|GO:0016705|GO:0031418
Vian3g00588 246 MobiDBLite consensus disorder prediction 1 22 - -
Vian3g00588 246 Gene3D q2cbj1_9rhob like domain 35 241 - -
Vian3g00588 246 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 45 240 IPR045054 -
Vian3g00588 246 MobiDBLite consensus disorder prediction 1 25 - -
Vian3g00588 246 FunFam 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 34 241 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00588 - - vun:114191541 463.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00588 3 5881512 5882955 Vian3g00588 3 5881512 5882955 ECH