Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00585 ATGACTTCGAACCCTTCACTTCTCCCTGAGATCGGACCTGACGGTCTCGCTAAAGAAGCCCCCGTCATCAGCTACACAGAGAAGATCATCGAAGCAGAACAGCTTCAATTGCAGAAATACATTCAAGAAAACTATTCTAAAATTCGTGATGTGGAGCGTGAGCTTGCAAATCTTTCACTGGAGATGAAACTTACAGCTGGTCCGAAAAAAGCAGCACTTGAACATTTGAGAAAGAAAATTGAGACGTCAACAGAAAGAATCCGTGTGGCCAAGCTAAAGGAAGAGCAGGCACGGAAGGTGTGGGAATCAGCCTCACAAGTAGTACGAGATGAGGAAGCAATGAAACAAAAGCTATGTGAAGACTTGAGTAATCTGGTTCAAGAAAGCAGTAACTCTCAGTTTGCTCGGCTGGAGGAATTAAAAAGAAGATTGGAAGCTTTGAATCCAAGTCGTGCATCAACTAATCTTTATCATGATGGGAGATCGGCAGCTTCTTCTCAGGATAGTACACCCCAGCATGGTTCCTCTGTCCCCAATGCAAAGGAGTCGAATGAGGGATCAACCGAGAGCGTTTCCAACCAAAGTAATTGTCAGAAAGCTGCAGCGAGAAATGGACCTAATCAGCAGCCACATAATGAAGGCGAAGGAAGAAGTAAGAAGAAAGTCAACTTGCAATCAAAAGGGAAGGGAATTGGTGTTGTGACCAAGGGTAGATCTTCAACTCCTGGCTGGACTGGGGCTGGCTTCGATGTAGATGGCAGAACCTGA 768 0.4531 MTSNPSLLPEIGPDGLAKEAPVISYTEKIIEAEQLQLQKYIQENYSKIRDVERELANLSLEMKLTAGPKKAALEHLRKKIETSTERIRVAKLKEEQARKVWESASQVVRDEEAMKQKLCEDLSNLVQESSNSQFARLEELKRRLEALNPSRASTNLYHDGRSAASSQDSTPQHGSSVPNAKESNEGSTESVSNQSNCQKAAARNGPNQQPHNEGEGRSKKKVNLQSKGKGIGVVTKGRSSTPGWTGAGFDVDGRT 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00585 255 Coils Coil 73 93 - -
Vian3g00585 255 PANTHER ACI13 1 255 - -
Vian3g00585 255 Coils Coil 108 128 - -
Vian3g00585 255 Coils Coil 41 61 - -
Vian3g00585 255 MobiDBLite consensus disorder prediction 151 255 - -
Vian3g00585 255 MobiDBLite consensus disorder prediction 151 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00585 Vian-Chr3 5846808 5850451 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00585 - - gmx:100801668 449.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00585 3 5846808 5850451 Vian3g00585 3 5846808 5850451 ECH
Vian8g01154 8 29989555 29998064 Vian3g00585 3 5846808 5850451 PCT