Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00565 ATGCTTCCCAAATCAATTCACCCCTCACTGGAACCTCAAACCAAAACACTTCATAACAAACCAACCCTCACTTCTTCCATCACCTCCCTCCTCAAACCCCTTTCCTCACCCCAAATCCCTCGTTCATGGATATTCTTCACTGTCCTCTTCATCCAGATCCTCCTCCTCTGCAACCTCCGCATGTTCTCCTCCCCAATCCCCTCTCCTCTCCCCGCCCCCATCGTCCATCACTCTTCCCAAGCTCTGGACCAATGCGGCTCCGGCAAGGTCTTCGTCTACGACCTCCCCCAAACCTTCAACTACGAAATCCTCCAGAATTGCGACAACCTCAACCCCTGGGGCTCCCGCTGCAACTCCCTCTCTAACAACGGATTCGGCCTGAACGCTGCCGCGCTGGCCGGAATCGTTCCTGAGGATCTCCTCCCGGCGTGGCACTGGACCGACCAGTTCGTCACTGAAGTCATCTTCCACAACCGATTATTGAATCACAGGTGCAGGGTTAAGGAGCCGGAATCCGCTACGGCATTCTACATACCGTTCTACGCTGGACTCGCGGTTGGGAAGTACCTGTGGCTCAACTCGACAGCTGAAGAACGCGATCGCCGCTGCGACATGATGCTGCGCTGGGTTATGGACCAACCGTTTTTTAAGAGATCAAACGGTTGGGATCATTTTATTACCATGGGACGCATCACATGGGATTTTCGTCGCTCCTCGGAACGCGATTGGGGTTCCAGCTGCATCTACAAGCCTGGGCTAAGAAACGTCACGCGCCTTCTCATAGAGCGTAATCCTTGGGACTATTTCGACGTAGGTGTTCCTTACCCCACCGGATTCCATCCGCGCTCTAAATCCGACGTCACGCGCTGGCAGAACTTCGTCCACGAGCGCCAACGCAGTGCGCTCTTCTGCTTCGCCGGCGCCCCTCGACGCGCGTTCCGCCAAGACTTCCGCGGGATTTTGCTGAGCCAATGCCGCGAAGCGGGCGAGTCGTGCCGCACCGTGAACTGCACTGGGACGCGGTGTTCCAACGGCACGTCGGCGATTCTCGAAACGTTTCTGGACTCTGATTTCTGCTTACAGCCGAGAGGGGACAGCTTCACACGCAGGTCCATTTTCGATTGCATGGTGGCCGGTTCGATTCCGGTTTTCTTCTGGCGGCGAAGCGCGTACCTGCAGTACGAGTTGTTCTTGCCGGTCGAACCGGGAAGTTACTCAGTTTACATAGATCGGAACGCAGTTAAGAATGGAACCGTAACCGTGAAAAACGTGCTGGAGAAGTTCACCAGGGAGAGAGTGCGGCAAATGAGGGAGAAAGTGATTGAGTACATTCCGAGGTTGATTTACGCTAACACGAAAGACGGGTTAGACGATATGAAGGATGCGTTCGATGTTGCCATCGAAGGTGTGCTGAAAAGGTTCAAGGAACAGGAACAACCGAAGTTTCACAAGTGGAAATAA 1461 0.5435 MLPKSIHPSLEPQTKTLHNKPTLTSSITSLLKPLSSPQIPRSWIFFTVLFIQILLLCNLRMFSSPIPSPLPAPIVHHSSQALDQCGSGKVFVYDLPQTFNYEILQNCDNLNPWGSRCNSLSNNGFGLNAAALAGIVPEDLLPAWHWTDQFVTEVIFHNRLLNHRCRVKEPESATAFYIPFYAGLAVGKYLWLNSTAEERDRRCDMMLRWVMDQPFFKRSNGWDHFITMGRITWDFRRSSERDWGSSCIYKPGLRNVTRLLIERNPWDYFDVGVPYPTGFHPRSKSDVTRWQNFVHERQRSALFCFAGAPRRAFRQDFRGILLSQCREAGESCRTVNCTGTRCSNGTSAILETFLDSDFCLQPRGDSFTRRSIFDCMVAGSIPVFFWRRSAYLQYELFLPVEPGSYSVYIDRNAVKNGTVTVKNVLEKFTRERVRQMREKVIEYIPRLIYANTKDGLDDMKDAFDVAIEGVLKRFKEQEQPKFHKWK 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00565 486 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 88 469 IPR004263 GO:0006486|GO:0016757
Vian3g00565 486 MobiDBLite consensus disorder prediction 1 20 - -
Vian3g00565 486 Pfam Exostosin family 85 423 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00565 Vian-Chr3 5648857 5650317 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00565 - - gsj:114403132 853.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00565 3 5648857 5650317 Vian3g00565 3 5648857 5650317 ECH