Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00564 ATGGAGAAGACAACACTTAAAGTTCGATGCCAGAGGATTGGGTGCGACGCCACCTTCTCCGAGGACGACAATCCCGACGGTTCCTGTCGATACCATGATTCGTGTATTAAAGATCTTGGTTTCTTTAAGCTTGTGCCTTTTCTTGTGGGACTTGGCTCCGTGAAATATCGCGTTAGAGCAAATACTATTCTATGTAGTGTAGTGGTTCAGTTCAGCTCGAGTGGCACATCTATGGTTAAATTAATGACTAAGGTAGTCATAATCGAGATCTTACCAAGGATTGACAAGCCTATATTTCATGATGGAACAAAAGAATGGAGTTGTTGCAAGAAAAGAAGTCATGATTTTAGCTTGTTTTTGGAAATTCCGGGATGTAAGACTGGAAAACATACAGCAGTCAAGCAAGTAATTGCTCCAGTGAAGAAGAACACCTCGCCCTCTCCAACTGCTGTTTCTTCAACCAATGCTTCATCAAAGGACTCTTGTTCTAGATGTAGGCAGGGTTTCTTTTGCTCAGATCATGGTTCTCAAAGCAAACCAGTTAACGTTGTAGACAAGTCCCCAAATCTTGTTGGAGATGCCTCTGCTATTAACAATTCAAGTGTTCAGGCTCCCAAACCTAAGAAGATAGTCGATATAAATGAGCCCCAAGTATGTAAAAATAAAGGATGCGGTCAAACTTTCAAGGAAAAGGATAATCATGACACTGCTTGCAGCTACCATCCCGGCCCTGCTGTTTTTCATGACCGGATGAGAGGGTGGAAGTGCTGTGATATTCATGTAAAAGAATTTGATGAGTTTATGAACATTCCTCCATGCTCAAAGGGATGGCATAGTGCAGATCCAGAGTCCTGA 855 0.4234 MEKTTLKVRCQRIGCDATFSEDDNPDGSCRYHDSCIKDLGFFKLVPFLVGLGSVKYRVRANTILCSVVVQFSSSGTSMVKLMTKVVIIEILPRIDKPIFHDGTKEWSCCKKRSHDFSLFLEIPGCKTGKHTAVKQVIAPVKKNTSPSPTAVSSTNASSKDSCSRCRQGFFCSDHGSQSKPVNVVDKSPNLVGDASAINNSSVQAPKPKKIVDINEPQVCKNKGCGQTFKEKDNHDTACSYHPGPAVFHDRMRGWKCCDIHVKEFDEFMNIPPCSKGWHSADPES 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00564 284 MobiDBLite consensus disorder prediction 142 162 - -
Vian3g00564 284 FunFam Cysteine and histidine-rich domain-containing protein RAR1 210 281 - -
Vian3g00564 284 ProSiteProfiles CHORD domain profile. 10 130 IPR007051 -
Vian3g00564 284 Pfam CHORD 218 278 IPR007051 -
Vian3g00564 284 Pfam CHORD 96 130 IPR007051 -
Vian3g00564 284 ProSiteProfiles CHORD domain profile. 219 278 IPR007051 -
Vian3g00564 284 Gene3D - 211 281 - -
Vian3g00564 284 Gene3D - 93 134 - -
Vian3g00564 284 PANTHER CYSTEINE AND HISTIDINE-RICH DOMAIN-CONTAINING PROTEIN RAR1 3 283 IPR043316 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00564 K13458 - gmx:100194419 376.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00564 3 5636158 5641016 Vian3g00564 3 5636158 5641016 ECH