Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00436 ATGAAACTGAGACTCAGATCCTTGGAATCTAAAGAAACCCTAAAAATCGAAGTCCCTAATTCATGTTCTCTGCAGCAACTCATTGATACCGTTTCTCACACCATCTCTTCTTCTTCCTCTTCTCTGCACCTTTCCCTCAACAGAAAGGACGAAATTCGCGCCTCTTCGCCGAACGACTCTCTTCACTCCCTTGGCGTCGCCGCCGGGGACCTCGTCTTCTACTCTCTCAACCCCACCGCCTTCTCCCACGAAACCCTCCCCCACAAGCCAGAGACTGCTTCCCGCGACCGACCCACCATCCAAAACTCCCCAGAAACCCTCGCCTGCGACGCCCCCTCGAACCCCACCGTGGAAAAGCATCCGACTTTGGATTCAGCGGAGGTGGAAACCGTCGAAATGATTGATGGATCTGACGAGGCGGTGGTGGTGGGCACCAATTCAGAACCTTTCTTTGTGAGAAGGGTTCTAAAAGAAGCCCTGGGAAACAACGTTAGTGATTTCAAGTTGTTGGTGTTTACGGTCCACGGTGTGATTCTTGAGTCTGGGTTTGTTCGAATCGACAAGGACTCCGGTATGGCGGTTAGTTGTTTTCACCTTCTTGATGATTCTCCTTCGGCGTTTTCTTCTGTGATATCGTTGAGGTATGCCCTGCCTGAAATTCTGGTTAATGGTGCTTCGTATAGTGTGAATTTGAAATTTCAGACATTGGGGCATTTTGTGAATGTTTGTGGTTCGTTGTCTGATGATACTGGGTCGAGGTTGCACTATGTTTGTCTGGATAGACGTAAATATGTTAGGCCATTAGAGTTGATGCTGGCAAATTCTGAATCTAAGGGCAGTGTTAATGACGGGGAAGAGGTTATCTTTGGGAACGAAGTTTTCGAAATGTGGAAGATGGTGAAAGATAGGCTTGCATTGCCACTGTTGATTGATCTTTGTGAAACGGCTGGATTGGATCTTCCACCTTGTTTCATGCGATTACCGATGGAGCTTAAGCTCTTGATTTTGGAGCGTCTTCCCGGTGTTGATTTGGCCAAAGTAGCTTGCACCTGTTCAGAGTTGCGATACTTGTCCACCAGCAATGAGTTGTGGAAGAAGAAGTATTTGGAGGAGTTTGGGCAAGGAGAGACTAGAGGGTGGCTTTTCAAAGATTTGTTTGCAGTGTCCTGGGAAACAAAAAAGAGGTCGCAAGGGGTTCCTTTTCGACGACATGGGATTTCAAGACACTTTTTTTTCCCACCCAACCCTTTTAGAATGCCTCCTGCTCCAATTTGGGGTGGAGAATATGGTGTGCAGCCAGTCTTTGGTGTTGCATTCCCTAGATACCAGCCAGGCCGGATTATCATTCCCCCGTGTACTCTGAGAGATTTCAACCTATAA 1380 0.4768 MKLRLRSLESKETLKIEVPNSCSLQQLIDTVSHTISSSSSSLHLSLNRKDEIRASSPNDSLHSLGVAAGDLVFYSLNPTAFSHETLPHKPETASRDRPTIQNSPETLACDAPSNPTVEKHPTLDSAEVETVEMIDGSDEAVVVGTNSEPFFVRRVLKEALGNNVSDFKLLVFTVHGVILESGFVRIDKDSGMAVSCFHLLDDSPSAFSSVISLRYALPEILVNGASYSVNLKFQTLGHFVNVCGSLSDDTGSRLHYVCLDRRKYVRPLELMLANSESKGSVNDGEEVIFGNEVFEMWKMVKDRLALPLLIDLCETAGLDLPPCFMRLPMELKLLILERLPGVDLAKVACTCSELRYLSTSNELWKKKYLEEFGQGETRGWLFKDLFAVSWETKKRSQGVPFRRHGISRHFFFPPNPFRMPPAPIWGGEYGVQPVFGVAFPRYQPGRIIIPPCTLRDFNL 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00436 459 SMART fbox_2 327 367 IPR001810 GO:0005515
Vian3g00436 459 CDD F-box_AtSKIP22-like 323 368 - -
Vian3g00436 459 Gene3D - 324 407 - -
Vian3g00436 459 PANTHER F-BOX PROTEIN SKIP22 1 445 - -
Vian3g00436 459 ProSiteProfiles F-box domain profile. 321 367 IPR001810 GO:0005515
Vian3g00436 459 Gene3D - 149 323 - -
Vian3g00436 459 Gene3D - 1 75 - -
Vian3g00436 459 MobiDBLite consensus disorder prediction 84 120 - -
Vian3g00436 459 Pfam F-box-like 326 369 IPR001810 GO:0005515
Vian3g00436 459 MobiDBLite consensus disorder prediction 96 110 - -
Vian3g00436 459 SUPERFAMILY F-box domain 321 381 IPR036047 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00436 K10293 - gmx:100778313 748.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00436 3 4108596 4109975 Vian3g00436 3 4108596 4109975 ECH