Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00423 ATGATTCACGGGACATCATTGGAGTCCATAATTCGAATTATTCATCCTTTTGAATGTGTTGTATTGTATTACGCGTCTTCATATATAACGGTCACTGAGATTTGGATCGTTGTTTTATTCAGGCTTGGCGTCCATACTTTGTCTTATGATTATTCTGCTACCACAAAGTGTTTAGTAGAACCTGAGAGAGCGCAGTATGGAGGAGGAATTATAGTAAATCCAGAATTTGATCACAACATAGATAGTTGGAAAGTGTTTGGAAAAGGGTCAATCAAGGAACAAATATCGAATGAAGGCAATAGATTCATTGTTGCTCACAACAGAACACAACCGTTGGATAGTTTCTCTCAGAAGGTCCAACTTCAGAAAGGCATGCTATACACCTTTTCTGCTTGGTTTCAGGTGAGTGAAGGAAGTGACACGGTGTCAGTGATGTTCAGAACAAAAGAAAGTGAACTGGTACGAGGTGGCCAGAGCAAAAATTCAACTGTGGAAATATGGGCTGACAATGTCTCGTTACAACCATTCACGAAAAAGCAGTGGAGATCACAACAAGATGCCAGCATTGAGAGGGTACGTAAGAGGAGAGTGAGATTCCAAATAACCCGTGTAAGTGAAACAGCATTGAAAGGAGCTACAGTCATCGCCACACCAGTAAAGTTGAACTTCCCATTTGGATGTGGAATGAACCATTACATCCTCACAAACAAAGACTACCAGAATTGGTTTGTGTCTAGGTTCAAATTCGCAACCTTCACTAATGAGATGAAGTGGTACAGTACAGAGAAAGAGCAAGGCGTGGAAAACTATACTGTCGCAGATGCCATGCTGAAATTTACCAAAGAGAATGGCATTTCTGTGAGAGGCCATAACATTTTCTGGGACGATCCAAAATATCAGCTTGAATGGGTCAAGACCCTATCACCTGAGGATTTGAAAAAAGCAGCAGCAAAAAGAATGGAATCTGTGGTTTCAAGATACAAAGGACAACTGATTGCATGGGATGTGATGAATGAGAATCTCCACTTCCACTTCTTTGAGGACAAACTCGGCCAAAACGCCTCTGCAGAAGCATATGCAACAGCTTACGAGCTTGATTCAACGCCAAAAATGTTCCTGAATGAGTATAACACCATTGAATATAGTGGGGATGAGGCCTCCAGCCCTGTCAACTATATAAAGAAAATTAAGGAGATTCTGTCGTTTCCAGGAGTAGCTGGAATGTCAGCAGCAATAGGGTTGCAAGGCCATTTTGCAAGTGGCCAGCCAAACCTTGCTTACATGAGGTCATCTCTTGATCTTCTTGCTACAACTGGACTTCCAATGTGGCTCACAGAAGTCAGTGTGGATCCACAACCAAGTCAGGCAGAGTATTTGGAAGAAGTACTGAGAGAGGCGTACTCTCATCCTGGTGTTGATGGGATTATAATGTTTTCTGGTCCAGCACAAGCTGGTTTCAATGCCACTACTCTGGCGGATGAGAATTTCAAAAATACTCCTGCTGGAGACGTTGTGGACAAGCTCATTCGGGAGTGGGGGACTGGGCCTAACATTGCCACAGCAGATGGCAGAGGAATCGTAGATATTTCACTGCACCATGGAGATTATGATGTAACTGTCACACATCCTCGAATCCACTCCCCTAGAAAGTTGAATCTGAGTGTAAAGAGAGATTTATCCCTTGAAACCATTCATGTGAAAATGTATTAA 1710 0.4251 MIHGTSLESIIRIIHPFECVVLYYASSYITVTEIWIVVLFRLGVHTLSYDYSATTKCLVEPERAQYGGGIIVNPEFDHNIDSWKVFGKGSIKEQISNEGNRFIVAHNRTQPLDSFSQKVQLQKGMLYTFSAWFQVSEGSDTVSVMFRTKESELVRGGQSKNSTVEIWADNVSLQPFTKKQWRSQQDASIERVRKRRVRFQITRVSETALKGATVIATPVKLNFPFGCGMNHYILTNKDYQNWFVSRFKFATFTNEMKWYSTEKEQGVENYTVADAMLKFTKENGISVRGHNIFWDDPKYQLEWVKTLSPEDLKKAAAKRMESVVSRYKGQLIAWDVMNENLHFHFFEDKLGQNASAEAYATAYELDSTPKMFLNEYNTIEYSGDEASSPVNYIKKIKEILSFPGVAGMSAAIGLQGHFASGQPNLAYMRSSLDLLATTGLPMWLTEVSVDPQPSQAEYLEEVLREAYSHPGVDGIIMFSGPAQAGFNATTLADENFKNTPAGDVVDKLIREWGTGPNIATADGRGIVDISLHHGDYDVTVTHPRIHSPRKLNLSVKRDLSLETIHVKMY 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00423 569 Gene3D Glycosidases 213 515 - -
Vian3g00423 569 Pfam Carbohydrate binding domain 69 144 IPR003305 GO:0016798
Vian3g00423 569 Pfam Glycosyl hydrolase family 10 220 459 IPR001000 GO:0004553|GO:0005975
Vian3g00423 569 SUPERFAMILY (Trans)glycosidases 210 515 IPR017853 -
Vian3g00423 569 SUPERFAMILY Galactose-binding domain-like 67 146 IPR008979 -
Vian3g00423 569 ProSiteProfiles Glycosyl hydrolases family 10 (GH10) domain profile. 215 508 IPR001000 GO:0004553|GO:0005975
Vian3g00423 569 SMART glyco_10 256 508 IPR001000 GO:0004553|GO:0005975
Vian3g00423 569 Gene3D - 59 183 - -
Vian3g00423 569 PANTHER GLYCOSYL HYDROLASE 48 549 IPR044846 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00423 Vian-Chr3 3961164 3966060 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00423 41 558 Glycoside Hydrolase AT4G33840 46.350 2.67e-175 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00423 - - gmx:100777980 933.71
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00423 3 3961164 3966060 Vian3g00423 3 3961164 3966060 ECH