Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00409 ATGGTGGCTGCCATTTCGGAAGACCCATTGACCTCTTCTGAGAAAGACAACAACAACAGCAATGGCACCATACCCAGAAGACCAAAGGGTAGGCAAGTTTCTTCAAGGTACATGTCTCACTCTCCTTCACCCTCGCCTTCTTCAACCACAACAACAACAACAACAACTTCAACCTCAACATCAACGACAAGTTCTTCTTCTCGTCGATTCCCTTCCCCTCTTCTTTCTCATTCCACCAATTCCTCTACCCCTTTGGTACCAAAGCGTTCCCAATCGGTGGACCGTCGCCACCCGCGCCCCTCAACGCCGCTTCCCGAGGCGGCAAAGCTTCTGGTGACTTCCACTCGGAGCCTGTCGGTTTCCTTTCAAGGAGAGGCCTTTTCGCTGCCCATTAGCAAGACCAAAGCCACCGCCGCCACCCCTCCGCCGCGGAAGGCCGCGACGCCGGAGCGACGGAGGGCCACTCCAGTGAAGGGGGAGAATTCAAGGCCTGCGGATCAGCATCGGTGGCCGGCGAGGACCAGGAAAGTGGATCATCTTTCCAAGAGTGTGGATATCAGTGATAAGAAGAAGGTTGTTGGGAATGGGTTTGGGAAAGTGGTGAGGGATTTGCAGAAGTCAATGGTGGTGGAAGGTGAAAAGAGAAGGGCTTCTTTTGATGGGTTAGGAGGGTTGAGTTTGGATTTGGGGAAAGTTGAGTTGTTGAAGGGTAATAGTAATGCTAATAATAATTCTATTACCAATGCTAATAATCATAATAATAATGACGGTGGTGGTGGGAATTTGGTGAGTAAGTCTTCAATGTCCTGTGATCTCACTGCTTCTGATACTGATAGTGTTTCCTCTGGGAGCACTTCTGGAGCACATGACTCTTCCGGGGCTGTCAAGGGCCCTAAGGAGCCTCGTGGCATTGTCATGTCTGCCAGGTTTTGGCAGGAAACTAATAGTCGGCTTCGCCGTCTGCAGGACCCTGGTTCACCCTTGTCCACCAGCCCTGCTTCTAGGATCGGGTTGCCAAACAAAAATGCACAGTTGAAAAGATATAACAGTGATGGTCCTATGTTGTCGCCACGAACTGTGGCTTCTCCTGTCAGGGGGAGTGTGAATGCTCGGCCTGCTTCGCCGAGTAAGCTTTGGGCAGGATCCTCTCCTTCAAGAGGGATGCCTAGTCCTGCTAGGGTGAGAAGCACAGTTGCCAGCGCCATCAATAGTGGTTCGGGTAACTCACCATCCATTCTTAGCTTCTCCGCTGATGTGCGGAGAGGGAAGATTGGGGAAGATCGGATATTTGATGCACATACATTGAGGCTTCTGTATAACCGGTATGTTCAGTGGCGGTTCGTGAATGCTAGGGCGGATGCTACATTTATGGTGCAGAAACTAAATGCTGAGAGACATTTGTGGAATGCATGGGTAACAATTTCAGAACTTCGGCATTCAGTCATACTTAAAAGAATCAAGCTTGTATTACTGAGGCAAAAGTTGAAGTTAACTTCCATTCTTAAAGGACAGATTTCTTATTTGGAGGAATGGGCCCTTCTAGATAGAGATCACTCCAGTTCTTTGCTTGGAGCAACTGAAGCTTTGAAGGCCAGTACACTCCGTCTTCCGGTTGTTGAAAAAGCAATAGCTGATGTACCAAATCTAAAGGATGCTTTGGGGTCAGCAGTTGATGTGATGCAGGCAATGGCATCCTCAATATACTCTCTTTCTTCAAAGGTGGAAGAAACTAACTGCTTGGTGGCGGAAATCCTAAAGGTGACCTCAAAAGAAAGGTTCTTGCTTGAACATTGCAAGGAGTTTTTGTCCTCGTTAGCAGCCATGCAGGTCAAGGATTGTAGCTTAAGAACACATACGTTACAACTTTCGCGTGCGCCAAATTCCAGCTGCCTGACAACACGTGTGTAG 1908 0.4879 MVAAISEDPLTSSEKDNNNSNGTIPRRPKGRQVSSRYMSHSPSPSPSSTTTTTTTTSTSTSTTSSSSRRFPSPLLSHSTNSSTPLVPKRSQSVDRRHPRPSTPLPEAAKLLVTSTRSLSVSFQGEAFSLPISKTKATAATPPPRKAATPERRRATPVKGENSRPADQHRWPARTRKVDHLSKSVDISDKKKVVGNGFGKVVRDLQKSMVVEGEKRRASFDGLGGLSLDLGKVELLKGNSNANNNSITNANNHNNNDGGGGNLVSKSSMSCDLTASDTDSVSSGSTSGAHDSSGAVKGPKEPRGIVMSARFWQETNSRLRRLQDPGSPLSTSPASRIGLPNKNAQLKRYNSDGPMLSPRTVASPVRGSVNARPASPSKLWAGSSPSRGMPSPARVRSTVASAINSGSGNSPSILSFSADVRRGKIGEDRIFDAHTLRLLYNRYVQWRFVNARADATFMVQKLNAERHLWNAWVTISELRHSVILKRIKLVLLRQKLKLTSILKGQISYLEEWALLDRDHSSSLLGATEALKASTLRLPVVEKAIADVPNLKDALGSAVDVMQAMASSIYSLSSKVEETNCLVAEILKVTSKERFLLEHCKEFLSSLAAMQVKDCSLRTHTLQLSRAPNSSCLTTRV 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00409 635 MobiDBLite consensus disorder prediction 319 338 - -
Vian3g00409 635 MobiDBLite consensus disorder prediction 146 182 - -
Vian3g00409 635 MobiDBLite consensus disorder prediction 133 182 - -
Vian3g00409 635 MobiDBLite consensus disorder prediction 243 303 - -
Vian3g00409 635 MobiDBLite consensus disorder prediction 1 107 - -
Vian3g00409 635 Pfam QWRF family 279 596 IPR007573 -
Vian3g00409 635 PANTHER AUGMIN FAMILY MEMBER 12 624 - -
Vian3g00409 635 MobiDBLite consensus disorder prediction 243 291 - -
Vian3g00409 635 MobiDBLite consensus disorder prediction 349 392 - -
Vian3g00409 635 MobiDBLite consensus disorder prediction 10 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00409 Vian-Chr3 3845806 3850325 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00409 - - gmx:100815206 982.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00409 3 3845806 3850325 Vian3g00409 3 3845806 3850325 ECH