Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00407 ATGACGATACCGAAACGAAGCTATTCTCGAATTGACACATTGGAGCTGAAAGCTCTAATTGTTAGGAAGGTTGGTCATCAGAGAGCTGACAAGTACTTTGATCAGCTTCGAAGATTATTGAGTTCAAAGATTAGCAAGTCAGAGTTTGACAAAATTTGCATCGTGATAATTGGGAGGGAAAATATCCCTCTTCACAATCGACTAATTAGAGCGATTTTGAAGAATGCGTGTCTGGCTAAAGTCCCACCAGTGAGAGGCTCTGCAAAAGCAGGGAGTGCTTTTAGTGTAAAGGATTCAAATGGGTTGCAGAGGAGTTCTATCCAAACGTTGTATGGGGATGCGTTTCCTCCTTCGTTGCGGAGGATTGGCCCTTCAGCTGCTCGAGACCGAAGGTTCAAGGGCCGCCCAAATGCTTTGGGGCCCTTGGGAAAACCCCAATTTGGTCTTGCGTCTGATGAATTTATATGTAAAACACTGGAGCAGCAGAGTGCGACAGAACTGAATTCCCTTGGCAGTAGACCTCCAATTTCCGTTGAAGAAGGAGAGGAGGTTGAACAGATGGCTGGAAGCCCCAGCGTTCAAAGTAGAAGCCCTGTTACGGCTCCTCTTGGTATATCGATGAATTTTGTTCGTGGTGGAAGACGTCATTCTAATGTTTCATTATGTAGCAAAGGTTATCCAGAGACTTGTCACACCAATGGAGATCTCCCTGACACCAGATCTTTGAGGAGTCGTCTGGAGCAAAAGTTGGAGAAGGAGGGTTTGACCGTGACAGTAGATTGTGTAAATCTATTGAATAATGCACTGGATTCATACCTGAAGAGATTGATTGAATCCTTTATGGATTTAGCTGGGTCAAGATGTAGAAATGAGCACCTAAGACAGCAAAACAGGCAGATGGCGACCGGTTCAAATGTTTTGCTACCTGGAAGATGCATGCAAAAAGCAACTGGATCTGCGGGTGCATCTATTTTAGATTTTCGCCTTGCAATGGAATTAAATCCTCAAGTTCTTGGACCAGATTGGCCTATACAACTTGAGAAAATTTGCATACGTGCCTCTGAAGATTGA 1071 0.4426 MTIPKRSYSRIDTLELKALIVRKVGHQRADKYFDQLRRLLSSKISKSEFDKICIVIIGRENIPLHNRLIRAILKNACLAKVPPVRGSAKAGSAFSVKDSNGLQRSSIQTLYGDAFPPSLRRIGPSAARDRRFKGRPNALGPLGKPQFGLASDEFICKTLEQQSATELNSLGSRPPISVEEGEEVEQMAGSPSVQSRSPVTAPLGISMNFVRGGRRHSNVSLCSKGYPETCHTNGDLPDTRSLRSRLEQKLEKEGLTVTVDCVNLLNNALDSYLKRLIESFMDLAGSRCRNEHLRQQNRQMATGSNVLLPGRCMQKATGSAGASILDFRLAMELNPQVLGPDWPIQLEKICIRASED 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00407 356 Pfam Transcriptional regulator of RNA polII, SAGA, subunit 7 283 IPR024738 GO:0070461
Vian3g00407 356 PANTHER TRANSCRIPTIONAL ADAPTER 1 4 355 IPR024738 GO:0070461
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00407 Vian-Chr3 3835229 3836299 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00407 - - gmx:100817344 601.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00407 3 3835229 3836299 Vian3g00407 3 3835229 3836299 ECH