Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vian3g00406 ATGAGCAGTGCTTTTCGCATGAACTCTGCTAAGATTTCTCATGTCATGGGGATGCAGAGGCACTTCATGTTGGTGAACCATGTCGTTCATCCAATCAAAACCTCTTCTTTTCTCTACAACACAGTGCATTCTAAACCTTTTATTAGATTGCCACATTTCTTCAGAAAACCCAGAGAATATGAAAATTCGTTGTCTTTGTTCTGTTCATCCTTTTGCTCTTCTTCCTCTTCTTCTTCATCTGCTGTTGCAACTTCCCTCTCCAAGGTTGGCTTTGTGAGTTGGTATTTGGGGATGATCAAGTCTTGGCCAATTTTGACAAAAAGTGTTACTTCTTCACTCATTTATATGGGTGCTGATTTATCTTCCCAGACTATTGTACGGGATTCTTCTGAAGCTTTTGATTTTATGAGGACTTCACGCATGGCAGGATATGGGATGATAGTTTTAGGGCCATCCCTGCATTTCTGGTACAATTTTGTGTCGAAGCTTTTCCCGAGGAGGGATATTTTCTCTACATTGAAGAAAATGGTCTTGGGTCAGACAATTTATGGACCTGCCATGACTGTTATTTTCTTCTCATTGAATGCACATTTGCAGGGTGAAACGGGATCAGAGATAGTTGCACGCTTAAAACGTGATTTTCTTTCAACAATGCTCGGTGCAATTATGTATTGGCCTATATGTGATTTTATTACCTTTAAGTTCATTCCTGTCAATTTACAGCCACTGATCACCAATTCATTTTCGTACTTGTGGACTATTTATATGACGTATATGGCAAGCCTAGAGAAAGCAGCCTGA 801 0.3983 MSSAFRMNSAKISHVMGMQRHFMLVNHVVHPIKTSSFLYNTVHSKPFIRLPHFFRKPREYENSLSLFCSSFCSSSSSSSSAVATSLSKVGFVSWYLGMIKSWPILTKSVTSSLIYMGADLSSQTIVRDSSEAFDFMRTSRMAGYGMIVLGPSLHFWYNFVSKLFPRRDIFSTLKKMVLGQTIYGPAMTVIFFSLNAHLQGETGSEIVARLKRDFLSTMLGAIMYWPICDFITFKFIPVNLQPLITNSFSYLWTIYMTYMASLEKAA 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vian3g00406 266 Pfam Mpv17 / PMP22 family 198 256 IPR007248 GO:0016020
Vian3g00406 266 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 91 259 IPR007248 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vian3g00406 Vian-Chr3 3829879 3833195 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vian3g00406 88 264 Miscellaneous Gene Families AT2G14860 68.927 3.07e-96 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vian3g00406 K13348 - gmx:100816797 384.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vian3g00406 3 3829879 3833195 Vian3g00406 3 3829879 3833195 ECH